Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
NHLRC1Q6VVB1 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.35□□□□□ -1.71
NHLRC1Q6VVB1 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.35□□□□□ -1.71
NHLRC1Q6VVB1 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.35□□□□□ -1.71
NHLRC1Q6VVB1 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
NHLRC1Q6VVB1 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
NHLRC1Q6VVB1 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
NHLRC1Q6VVB1 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
NHLRC1Q6VVB1 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NHLRC1Q6VVB1 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
NHLRC1Q6VVB1 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
NHLRC1Q6VVB1 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
NHLRC1Q6VVB1 AC015813.6-201ENST00000624409 5808 ntBASIC4.34□□□□□ -1.71
NHLRC1Q6VVB1 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
NHLRC1Q6VVB1 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
NHLRC1Q6VVB1 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
NHLRC1Q6VVB1 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
NHLRC1Q6VVB1 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
NHLRC1Q6VVB1 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
NHLRC1Q6VVB1 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
NHLRC1Q6VVB1 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
NHLRC1Q6VVB1 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
NHLRC1Q6VVB1 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
NHLRC1Q6VVB1 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
NHLRC1Q6VVB1 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
NHLRC1Q6VVB1 RN7SKP213-201ENST00000410746 298 ntBASIC4.34□□□□□ -1.71
NHLRC1Q6VVB1 CHEK2P3-201ENST00000416118 248 ntBASIC4.34□□□□□ -1.71
NHLRC1Q6VVB1 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.34□□□□□ -1.71
NHLRC1Q6VVB1 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC4.34□□□□□ -1.71
NHLRC1Q6VVB1 AL512637.2-201ENST00000431287 1256 ntBASIC4.34□□□□□ -1.71
NHLRC1Q6VVB1 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.34□□□□□ -1.71
NHLRC1Q6VVB1 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.34□□□□□ -1.71
NHLRC1Q6VVB1 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.34□□□□□ -1.71
NHLRC1Q6VVB1 AC105402.2-201ENST00000438503 358 ntBASIC4.34□□□□□ -1.71
NHLRC1Q6VVB1 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.34□□□□□ -1.71
NHLRC1Q6VVB1 RHEBP2-201ENST00000450289 600 ntBASIC4.34□□□□□ -1.71
NHLRC1Q6VVB1 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.34□□□□□ -1.71
NHLRC1Q6VVB1 CYCSP34-201ENST00000458172 304 ntBASIC4.34□□□□□ -1.71
NHLRC1Q6VVB1 AC108751.2-201ENST00000469993 231 ntBASIC4.34□□□□□ -1.71
NHLRC1Q6VVB1 AC090686.1-201ENST00000481577 749 ntBASIC4.34□□□□□ -1.71
NHLRC1Q6VVB1 RN7SL558P-201ENST00000497468 299 ntBASIC4.34□□□□□ -1.71
NHLRC1Q6VVB1 GAPDHP56-201ENST00000506031 988 ntBASIC4.34□□□□□ -1.71
NHLRC1Q6VVB1 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
NHLRC1Q6VVB1 ATG10-208ENST00000513634 618 ntTSL 2 BASIC4.34□□□□□ -1.71
NHLRC1Q6VVB1 RN7SKP96-201ENST00000516948 297 ntBASIC4.34□□□□□ -1.71
NHLRC1Q6VVB1 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.34□□□□□ -1.71
NHLRC1Q6VVB1 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.34□□□□□ -1.71
NHLRC1Q6VVB1 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.34□□□□□ -1.71
NHLRC1Q6VVB1 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.34□□□□□ -1.71
NHLRC1Q6VVB1 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.34□□□□□ -1.71
NHLRC1Q6VVB1 SERPINE4P-201ENST00000554978 281 ntBASIC4.34□□□□□ -1.71
NHLRC1Q6VVB1 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.34□□□□□ -1.71
NHLRC1Q6VVB1 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.34□□□□□ -1.71
NHLRC1Q6VVB1 RNF138P2-201ENST00000603490 592 ntBASIC4.34□□□□□ -1.71
NHLRC1Q6VVB1 AC020910.3-201ENST00000603701 874 ntBASIC4.34□□□□□ -1.71
NHLRC1Q6VVB1 AC008759.3-201ENST00000613300 508 ntBASIC4.34□□□□□ -1.71
NHLRC1Q6VVB1 VN1R9P-201ENST00000614184 867 ntBASIC4.34□□□□□ -1.71
NHLRC1Q6VVB1 MIR6719-201ENST00000622428 87 ntBASIC4.34□□□□□ -1.71
NHLRC1Q6VVB1 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4.34□□□□□ -1.71
NHLRC1Q6VVB1 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.34□□□□□ -1.71
NHLRC1Q6VVB1 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
NHLRC1Q6VVB1 MTCO1P6-201ENST00000481192 1384 ntBASIC4.34□□□□□ -1.71
NHLRC1Q6VVB1 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
NHLRC1Q6VVB1 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
NHLRC1Q6VVB1 INTS6P1-201ENST00000504674 2530 ntBASIC4.34□□□□□ -1.72
NHLRC1Q6VVB1 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.34□□□□□ -1.72
NHLRC1Q6VVB1 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.34□□□□□ -1.72
NHLRC1Q6VVB1 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.33□□□□□ -1.72
NHLRC1Q6VVB1 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.33□□□□□ -1.72
NHLRC1Q6VVB1 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
NHLRC1Q6VVB1 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
NHLRC1Q6VVB1 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.33□□□□□ -1.72
NHLRC1Q6VVB1 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
NHLRC1Q6VVB1 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
NHLRC1Q6VVB1 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
NHLRC1Q6VVB1 RNU6-543P-201ENST00000362576 108 ntBASIC4.33□□□□□ -1.72
NHLRC1Q6VVB1 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.33□□□□□ -1.72
NHLRC1Q6VVB1 MIR937-201ENST00000401271 86 ntBASIC4.33□□□□□ -1.72
NHLRC1Q6VVB1 AL021331.1-201ENST00000402817 582 ntBASIC4.33□□□□□ -1.72
NHLRC1Q6VVB1 ARL4AP5-201ENST00000404372 599 ntBASIC4.33□□□□□ -1.72
NHLRC1Q6VVB1 SNORA11C-201ENST00000408532 129 ntBASIC4.33□□□□□ -1.72
NHLRC1Q6VVB1 RNU2-6P-201ENST00000411404 190 ntBASIC4.33□□□□□ -1.72
NHLRC1Q6VVB1 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.33□□□□□ -1.72
NHLRC1Q6VVB1 RGS17P1-201ENST00000423358 553 ntBASIC4.33□□□□□ -1.72
NHLRC1Q6VVB1 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC4.33□□□□□ -1.72
NHLRC1Q6VVB1 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.33□□□□□ -1.72
NHLRC1Q6VVB1 AC092162.1-201ENST00000432828 434 ntBASIC4.33□□□□□ -1.72
NHLRC1Q6VVB1 AC092809.1-201ENST00000441469 474 ntBASIC4.33□□□□□ -1.72
NHLRC1Q6VVB1 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.33□□□□□ -1.72
NHLRC1Q6VVB1 RPS6P2-201ENST00000454208 705 ntBASIC4.33□□□□□ -1.72
NHLRC1Q6VVB1 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.33□□□□□ -1.72
NHLRC1Q6VVB1 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC4.33□□□□□ -1.72
NHLRC1Q6VVB1 RPS17P11-201ENST00000474297 293 ntBASIC4.33□□□□□ -1.72
NHLRC1Q6VVB1 RPL7AP6-201ENST00000477943 801 ntBASIC4.33□□□□□ -1.72
NHLRC1Q6VVB1 AC011037.1-201ENST00000483964 558 ntBASIC4.33□□□□□ -1.72
NHLRC1Q6VVB1 AC004453.1-201ENST00000487895 408 ntBASIC4.33□□□□□ -1.72
NHLRC1Q6VVB1 HMGB1P21-201ENST00000502313 581 ntBASIC4.33□□□□□ -1.72
NHLRC1Q6VVB1 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.33□□□□□ -1.72
NHLRC1Q6VVB1 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC4.33□□□□□ -1.72
NHLRC1Q6VVB1 AC090819.1-201ENST00000523800 1111 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms