Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SCN1BQ07699 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.38□□□□□ -1.71
SCN1BQ07699 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SCN1BQ07699 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SCN1BQ07699 MIR323A-201ENST00000362199 86 ntBASIC4.38□□□□□ -1.71
SCN1BQ07699 RNA5SP90-201ENST00000364801 99 ntBASIC4.38□□□□□ -1.71
SCN1BQ07699 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SCN1BQ07699 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC4.38□□□□□ -1.71
SCN1BQ07699 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SCN1BQ07699 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SCN1BQ07699 SNORA66-201ENST00000384792 133 ntBASIC4.38□□□□□ -1.71
SCN1BQ07699 MIR600-201ENST00000385007 98 ntBASIC4.38□□□□□ -1.71
SCN1BQ07699 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SCN1BQ07699 AC009804.1-201ENST00000400949 179 ntBASIC4.38□□□□□ -1.71
SCN1BQ07699 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.38□□□□□ -1.71
SCN1BQ07699 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.38□□□□□ -1.71
SCN1BQ07699 RNU2-21P-201ENST00000410368 188 ntBASIC4.38□□□□□ -1.71
SCN1BQ07699 AL390774.1-201ENST00000411924 246 ntBASIC4.38□□□□□ -1.71
SCN1BQ07699 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.38□□□□□ -1.71
SCN1BQ07699 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.38□□□□□ -1.71
SCN1BQ07699 GAPDHP49-201ENST00000421421 961 ntBASIC4.38□□□□□ -1.71
SCN1BQ07699 RWDD4P2-201ENST00000426392 563 ntBASIC4.38□□□□□ -1.71
SCN1BQ07699 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC4.38□□□□□ -1.71
SCN1BQ07699 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.38□□□□□ -1.71
SCN1BQ07699 RPL5P30-201ENST00000465511 891 ntBASIC4.38□□□□□ -1.71
SCN1BQ07699 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SCN1BQ07699 RWDD4P1-201ENST00000488019 565 ntBASIC4.38□□□□□ -1.71
SCN1BQ07699 RN7SL184P-201ENST00000488308 297 ntBASIC4.38□□□□□ -1.71
SCN1BQ07699 AC104971.1-201ENST00000495117 578 ntBASIC4.38□□□□□ -1.71
SCN1BQ07699 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SCN1BQ07699 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.38□□□□□ -1.71
SCN1BQ07699 RNU6-202P-201ENST00000515998 96 ntBASIC4.38□□□□□ -1.71
SCN1BQ07699 RNA5SP373-201ENST00000517271 95 ntBASIC4.38□□□□□ -1.71
SCN1BQ07699 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC4.38□□□□□ -1.71
SCN1BQ07699 MYL12AP1-201ENST00000518490 515 ntBASIC4.38□□□□□ -1.71
SCN1BQ07699 AP003355.1-201ENST00000518956 587 ntBASIC4.38□□□□□ -1.71
SCN1BQ07699 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.38□□□□□ -1.71
SCN1BQ07699 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.38□□□□□ -1.71
SCN1BQ07699 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.38□□□□□ -1.71
SCN1BQ07699 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.38□□□□□ -1.71
SCN1BQ07699 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.38□□□□□ -1.71
SCN1BQ07699 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC4.38□□□□□ -1.71
SCN1BQ07699 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.38□□□□□ -1.71
SCN1BQ07699 AC027455.1-201ENST00000574104 594 ntBASIC4.38□□□□□ -1.71
SCN1BQ07699 AC020978.7-201ENST00000575953 1187 ntBASIC4.38□□□□□ -1.71
SCN1BQ07699 AP002906.1-201ENST00000603405 233 ntBASIC4.38□□□□□ -1.71
SCN1BQ07699 AC018926.1-201ENST00000616335 435 ntBASIC4.38□□□□□ -1.71
SCN1BQ07699 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.38□□□□□ -1.71
SCN1BQ07699 AL356118.1-201ENST00000635272 1078 ntBASIC4.38□□□□□ -1.71
SCN1BQ07699 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SCN1BQ07699 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
SCN1BQ07699 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SCN1BQ07699 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
SCN1BQ07699 DCAF13P3-201ENST00000561147 1334 ntBASIC4.38□□□□□ -1.71
SCN1BQ07699 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
SCN1BQ07699 AC027290.2-201ENST00000623210 18662 ntBASIC4.38□□□□□ -1.71
SCN1BQ07699 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.38□□□□□ -1.71
SCN1BQ07699 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
SCN1BQ07699 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SCN1BQ07699 ERCC6-202ENST00000374127 1782 ntBASIC4.37□□□□□ -1.71
SCN1BQ07699 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SCN1BQ07699 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SCN1BQ07699 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SCN1BQ07699 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SCN1BQ07699 EOGT-210ENST00000615922 1931 ntBASIC4.37□□□□□ -1.71
SCN1BQ07699 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SCN1BQ07699 RNU1-108P-201ENST00000362556 161 ntBASIC4.37□□□□□ -1.71
SCN1BQ07699 RNA5SP242-201ENST00000364171 118 ntBASIC4.37□□□□□ -1.71
SCN1BQ07699 U6.112-201ENST00000384129 70 ntBASIC4.37□□□□□ -1.71
SCN1BQ07699 RNU6-932P-201ENST00000391108 106 ntBASIC4.37□□□□□ -1.71
SCN1BQ07699 SNORA17A-201ENST00000391185 133 ntBASIC4.37□□□□□ -1.71
SCN1BQ07699 SNORA11.5-201ENST00000408163 128 ntBASIC4.37□□□□□ -1.71
SCN1BQ07699 RPL35AP24-201ENST00000413846 330 ntBASIC4.37□□□□□ -1.71
SCN1BQ07699 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.37□□□□□ -1.71
SCN1BQ07699 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC4.37□□□□□ -1.71
SCN1BQ07699 RPS15AP40-201ENST00000419621 391 ntBASIC4.37□□□□□ -1.71
SCN1BQ07699 RPL7L1P9-201ENST00000431298 745 ntBASIC4.37□□□□□ -1.71
SCN1BQ07699 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.37□□□□□ -1.71
SCN1BQ07699 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.37□□□□□ -1.71
SCN1BQ07699 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.37□□□□□ -1.71
SCN1BQ07699 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC4.37□□□□□ -1.71
SCN1BQ07699 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC4.37□□□□□ -1.71
SCN1BQ07699 SETP20-201ENST00000457046 852 ntBASIC4.37□□□□□ -1.71
SCN1BQ07699 RPS27AP2-201ENST00000457576 465 ntBASIC4.37□□□□□ -1.71
SCN1BQ07699 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.37□□□□□ -1.71
SCN1BQ07699 AC087385.1-201ENST00000475062 312 ntBASIC4.37□□□□□ -1.71
SCN1BQ07699 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.37□□□□□ -1.71
SCN1BQ07699 RPS4XP18-201ENST00000495480 763 ntBASIC4.37□□□□□ -1.71
SCN1BQ07699 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SCN1BQ07699 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC4.37□□□□□ -1.71
SCN1BQ07699 AC016550.1-201ENST00000505348 785 ntBASIC4.37□□□□□ -1.71
SCN1BQ07699 GTF2F2P1-201ENST00000511083 675 ntBASIC4.37□□□□□ -1.71
SCN1BQ07699 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.37□□□□□ -1.71
SCN1BQ07699 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC4.37□□□□□ -1.71
SCN1BQ07699 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC4.37□□□□□ -1.71
SCN1BQ07699 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC4.37□□□□□ -1.71
SCN1BQ07699 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.37□□□□□ -1.71
SCN1BQ07699 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.37□□□□□ -1.71
SCN1BQ07699 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC4.37□□□□□ -1.71
SCN1BQ07699 AC090888.3-201ENST00000558917 509 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms