Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 AF186190.1-201ENST00000517470 480 ntBASIC5.44□□□□□ -1.54
RIPK4P57078 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
RIPK4P57078 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC5.44□□□□□ -1.54
RIPK4P57078 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC5.44□□□□□ -1.54
RIPK4P57078 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RIPK4P57078 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
RIPK4P57078 ZYXP1-201ENST00000617638 118 ntBASIC5.44□□□□□ -1.54
RIPK4P57078 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RIPK4P57078 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
RIPK4P57078 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
RIPK4P57078 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RIPK4P57078 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RIPK4P57078 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC5.43□□□□□ -1.54
RIPK4P57078 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
RIPK4P57078 AL356317.1-201ENST00000396110 1436 ntBASIC5.43□□□□□ -1.54
RIPK4P57078 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
RIPK4P57078 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
RIPK4P57078 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RIPK4P57078 OR11H4-201ENST00000315409 1082 ntBASIC5.43□□□□□ -1.54
RIPK4P57078 OR52B1P-201ENST00000316506 909 ntBASIC5.43□□□□□ -1.54
RIPK4P57078 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.43□□□□□ -1.54
RIPK4P57078 RNA5SP515-201ENST00000364570 118 ntBASIC5.43□□□□□ -1.54
RIPK4P57078 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC5.43□□□□□ -1.54
RIPK4P57078 MIR93-201ENST00000385024 80 ntBASIC5.43□□□□□ -1.54
RIPK4P57078 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
RIPK4P57078 TRAV35-201ENST00000390462 330 ntBASIC5.43□□□□□ -1.54
RIPK4P57078 GSTM3P2-201ENST00000412746 530 ntBASIC5.43□□□□□ -1.54
RIPK4P57078 RCC2P2-201ENST00000422174 918 ntBASIC5.43□□□□□ -1.54
RIPK4P57078 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC5.43□□□□□ -1.54
RIPK4P57078 MAPRE1P3-201ENST00000435438 796 ntBASIC5.43□□□□□ -1.54
RIPK4P57078 GSTA7P-201ENST00000438425 448 ntBASIC5.43□□□□□ -1.54
RIPK4P57078 AC090589.1-201ENST00000473109 362 ntBASIC5.43□□□□□ -1.54
RIPK4P57078 HPRT1P2-201ENST00000505250 544 ntBASIC5.43□□□□□ -1.54
RIPK4P57078 KRT19P6-201ENST00000510983 209 ntBASIC5.43□□□□□ -1.54
RIPK4P57078 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC5.43□□□□□ -1.54
RIPK4P57078 HMGB3P13-201ENST00000511263 607 ntBASIC5.43□□□□□ -1.54
RIPK4P57078 MYL12AP1-201ENST00000518490 515 ntBASIC5.43□□□□□ -1.54
RIPK4P57078 AC069240.1-201ENST00000548774 375 ntBASIC5.43□□□□□ -1.54
RIPK4P57078 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RIPK4P57078 MTND6P33-201ENST00000571794 183 ntBASIC5.43□□□□□ -1.54
RIPK4P57078 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC5.43□□□□□ -1.54
RIPK4P57078 AC008638.3-201ENST00000603341 463 ntBASIC5.43□□□□□ -1.54
RIPK4P57078 AC067959.1-201ENST00000604334 379 ntBASIC5.43□□□□□ -1.54
RIPK4P57078 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC5.43□□□□□ -1.54
RIPK4P57078 AC009704.2-201ENST00000618739 483 ntBASIC5.43□□□□□ -1.54
RIPK4P57078 AC112484.5-201ENST00000624189 228 ntBASIC5.43□□□□□ -1.54
RIPK4P57078 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
RIPK4P57078 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
RIPK4P57078 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC5.42□□□□□ -1.54
RIPK4P57078 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RIPK4P57078 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RIPK4P57078 MFSD8-220ENST00000641243 1422 ntBASIC5.42□□□□□ -1.54
RIPK4P57078 IQCB2P-201ENST00000401788 1633 ntBASIC5.42□□□□□ -1.54
RIPK4P57078 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
RIPK4P57078 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
RIPK4P57078 MIR372-201ENST00000362225 67 ntBASIC5.42□□□□□ -1.54
RIPK4P57078 RNA5SP479-201ENST00000364858 117 ntBASIC5.42□□□□□ -1.54
RIPK4P57078 HYKK-202ENST00000408962 847 ntTSL 5 BASIC5.42□□□□□ -1.54
RIPK4P57078 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.42□□□□□ -1.54
RIPK4P57078 AC108032.1-201ENST00000416706 207 ntBASIC5.42□□□□□ -1.54
RIPK4P57078 YY1P1-201ENST00000427625 668 ntBASIC5.42□□□□□ -1.54
RIPK4P57078 AC069285.2-201ENST00000440210 275 ntBASIC5.42□□□□□ -1.54
RIPK4P57078 AL161747.1-201ENST00000480068 358 ntBASIC5.42□□□□□ -1.54
RIPK4P57078 HYKK-203ENST00000563233 734 ntTSL 2 BASIC5.42□□□□□ -1.54
RIPK4P57078 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RIPK4P57078 AC092653.1-201ENST00000608509 531 ntBASIC5.42□□□□□ -1.54
RIPK4P57078 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RIPK4P57078 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
RIPK4P57078 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RIPK4P57078 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RIPK4P57078 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
RIPK4P57078 ERCC6-202ENST00000374127 1782 ntBASIC5.42□□□□□ -1.54
RIPK4P57078 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
RIPK4P57078 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.42□□□□□ -1.54
RIPK4P57078 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC5.42□□□□□ -1.54
RIPK4P57078 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
RIPK4P57078 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC5.41□□□□□ -1.54
RIPK4P57078 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
RIPK4P57078 RLIMP1-201ENST00000339626 1680 ntBASIC5.41□□□□□ -1.54
RIPK4P57078 AC027228.2-201ENST00000567141 2154 ntBASIC5.41□□□□□ -1.54
RIPK4P57078 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC5.41□□□□□ -1.54
RIPK4P57078 ENSAP1-201ENST00000392855 326 ntBASIC5.41□□□□□ -1.54
RIPK4P57078 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RIPK4P57078 AL607077.1-201ENST00000401718 499 ntBASIC5.41□□□□□ -1.54
RIPK4P57078 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.41□□□□□ -1.54
RIPK4P57078 SMC4P1-201ENST00000414479 527 ntBASIC5.41□□□□□ -1.54
RIPK4P57078 AC007064.3-201ENST00000422608 359 ntBASIC5.41□□□□□ -1.54
RIPK4P57078 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5.41□□□□□ -1.54
RIPK4P57078 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC5.41□□□□□ -1.54
RIPK4P57078 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.41□□□□□ -1.54
RIPK4P57078 RPS6P4-201ENST00000494693 758 ntBASIC5.41□□□□□ -1.54
RIPK4P57078 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC5.41□□□□□ -1.54
RIPK4P57078 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC5.41□□□□□ -1.54
RIPK4P57078 AC124068.1-201ENST00000563131 678 ntBASIC5.41□□□□□ -1.54
RIPK4P57078 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC5.41□□□□□ -1.54
RIPK4P57078 SS18L2P2-201ENST00000583960 235 ntBASIC5.41□□□□□ -1.54
RIPK4P57078 MIR432-201ENST00000606207 94 ntBASIC5.41□□□□□ -1.54
RIPK4P57078 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC5.41□□□□□ -1.54
RIPK4P57078 AC026951.1-201ENST00000559530 2459 ntBASIC5.41□□□□□ -1.54
RIPK4P57078 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms