Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 HMGN2P36-201ENST00000529541 409 ntBASIC5.33□□□□□ -1.56
PER3P56645 OR6M2P-201ENST00000529831 871 ntBASIC5.33□□□□□ -1.56
PER3P56645 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.33□□□□□ -1.56
PER3P56645 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC5.33□□□□□ -1.56
PER3P56645 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.33□□□□□ -1.56
PER3P56645 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.33□□□□□ -1.56
PER3P56645 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.33□□□□□ -1.56
PER3P56645 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.33□□□□□ -1.56
PER3P56645 RN7SL544P-201ENST00000617232 284 ntBASIC5.33□□□□□ -1.56
PER3P56645 AL445670.1-201ENST00000618889 801 ntBASIC5.33□□□□□ -1.56
PER3P56645 RN7SL763P-201ENST00000620922 284 ntBASIC5.33□□□□□ -1.56
PER3P56645 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.33□□□□□ -1.56
PER3P56645 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.33□□□□□ -1.56
PER3P56645 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.33□□□□□ -1.56
PER3P56645 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
PER3P56645 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
PER3P56645 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PER3P56645 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
PER3P56645 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.33□□□□□ -1.56
PER3P56645 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.33□□□□□ -1.56
PER3P56645 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PER3P56645 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PER3P56645 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.32□□□□□ -1.56
PER3P56645 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PER3P56645 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PER3P56645 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
PER3P56645 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
PER3P56645 CASC19-248ENST00000641674 1356 ntBASIC5.32□□□□□ -1.56
PER3P56645 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.32□□□□□ -1.56
PER3P56645 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.32□□□□□ -1.56
PER3P56645 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PER3P56645 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PER3P56645 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.32□□□□□ -1.56
PER3P56645 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
PER3P56645 RNU4-21P-201ENST00000362802 126 ntBASIC5.32□□□□□ -1.56
PER3P56645 RNU6-582P-201ENST00000362989 107 ntBASIC5.32□□□□□ -1.56
PER3P56645 SNORA4.1-201ENST00000364263 144 ntBASIC5.32□□□□□ -1.56
PER3P56645 RN7SKP124-201ENST00000364730 341 ntBASIC5.32□□□□□ -1.56
PER3P56645 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.32□□□□□ -1.56
PER3P56645 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PER3P56645 OR52E6-202ENST00000379946 954 ntBASIC5.32□□□□□ -1.56
PER3P56645 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
PER3P56645 SNORD116-23-201ENST00000384645 92 ntBASIC5.32□□□□□ -1.56
PER3P56645 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
PER3P56645 VDAC2P1-201ENST00000399358 958 ntBASIC5.32□□□□□ -1.56
PER3P56645 HMGB1P20-201ENST00000402555 677 ntBASIC5.32□□□□□ -1.56
PER3P56645 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.32□□□□□ -1.56
PER3P56645 RPL23AP47-201ENST00000408017 460 ntBASIC5.32□□□□□ -1.56
PER3P56645 RNU6-648P-201ENST00000410190 107 ntBASIC5.32□□□□□ -1.56
PER3P56645 RPL7P8-201ENST00000411964 730 ntBASIC5.32□□□□□ -1.56
PER3P56645 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.32□□□□□ -1.56
PER3P56645 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.32□□□□□ -1.56
PER3P56645 NPM1P18-201ENST00000434232 732 ntBASIC5.32□□□□□ -1.56
PER3P56645 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.32□□□□□ -1.56
PER3P56645 RPS3AP38-201ENST00000435889 763 ntBASIC5.32□□□□□ -1.56
PER3P56645 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.32□□□□□ -1.56
PER3P56645 PPIAP17-201ENST00000438507 471 ntBASIC5.32□□□□□ -1.56
PER3P56645 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC5.32□□□□□ -1.56
PER3P56645 GAPDHP14-201ENST00000450472 937 ntBASIC5.32□□□□□ -1.56
PER3P56645 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.32□□□□□ -1.56
PER3P56645 RN7SL269P-201ENST00000467795 305 ntBASIC5.32□□□□□ -1.56
PER3P56645 AC022215.1-201ENST00000481770 362 ntBASIC5.32□□□□□ -1.56
PER3P56645 AC109486.1-201ENST00000486833 374 ntBASIC5.32□□□□□ -1.56
PER3P56645 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.32□□□□□ -1.56
PER3P56645 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PER3P56645 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC5.32□□□□□ -1.56
PER3P56645 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.32□□□□□ -1.56
PER3P56645 AC027026.1-201ENST00000532323 742 ntBASIC5.32□□□□□ -1.56
PER3P56645 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.32□□□□□ -1.56
PER3P56645 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.32□□□□□ -1.56
PER3P56645 BLZF2P-201ENST00000553776 1130 ntBASIC5.32□□□□□ -1.56
PER3P56645 AC006362.1-201ENST00000567392 174 ntBASIC5.32□□□□□ -1.56
PER3P56645 MIR1269B-201ENST00000580405 75 ntBASIC5.32□□□□□ -1.56
PER3P56645 MIR4260-201ENST00000583107 67 ntBASIC5.32□□□□□ -1.56
PER3P56645 AL031667.3-201ENST00000620124 655 ntBASIC5.32□□□□□ -1.56
PER3P56645 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.32□□□□□ -1.56
PER3P56645 AC008443.7-201ENST00000622195 246 ntBASIC5.32□□□□□ -1.56
PER3P56645 AC124312.6-202ENST00000623624 418 ntBASIC5.32□□□□□ -1.56
PER3P56645 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.32□□□□□ -1.56
PER3P56645 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.32□□□□□ -1.56
PER3P56645 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PER3P56645 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PER3P56645 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PER3P56645 C4BPAP1-201ENST00000415474 1893 ntBASIC5.32□□□□□ -1.56
PER3P56645 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PER3P56645 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.32□□□□□ -1.56
PER3P56645 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PER3P56645 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
PER3P56645 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
PER3P56645 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
PER3P56645 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PER3P56645 AC002525.1-201ENST00000624392 1622 ntBASIC5.31□□□□□ -1.56
PER3P56645 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.31□□□□□ -1.56
PER3P56645 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PER3P56645 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PER3P56645 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PER3P56645 SMG1P7-201ENST00000565246 2704 ntBASIC5.31□□□□□ -1.56
PER3P56645 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PER3P56645 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PER3P56645 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms