Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AC106798.1-202ENST00000506819 589 ntTSL 4 BASIC7□□□□□ -1.29
VARSP26640 MTCYBP40-201ENST00000509390 1135 ntBASIC7□□□□□ -1.29
VARSP26640 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC7□□□□□ -1.29
VARSP26640 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC7□□□□□ -1.29
VARSP26640 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC7□□□□□ -1.29
VARSP26640 AC068831.4-201ENST00000556118 109 ntBASIC7□□□□□ -1.29
VARSP26640 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC7□□□□□ -1.29
VARSP26640 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC7□□□□□ -1.29
VARSP26640 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC7□□□□□ -1.29
VARSP26640 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
VARSP26640 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC7□□□□□ -1.29
VARSP26640 AC004696.1-201ENST00000614345 607 ntBASIC7□□□□□ -1.29
VARSP26640 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC7□□□□□ -1.29
VARSP26640 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC7□□□□□ -1.29
VARSP26640 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC7□□□□□ -1.29
VARSP26640 AC002115.2-201ENST00000640449 603 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
VARSP26640 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC7□□□□□ -1.29
VARSP26640 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
VARSP26640 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
VARSP26640 VPS35P1-201ENST00000563400 1518 ntBASIC7□□□□□ -1.29
VARSP26640 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC7□□□□□ -1.29
VARSP26640 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
VARSP26640 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
VARSP26640 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
VARSP26640 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
VARSP26640 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
VARSP26640 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
VARSP26640 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
VARSP26640 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC6.99□□□□□ -1.29
VARSP26640 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
VARSP26640 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
VARSP26640 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
VARSP26640 ZNF807-201ENST00000328088 1707 ntBASIC6.99□□□□□ -1.29
VARSP26640 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
VARSP26640 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
VARSP26640 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
VARSP26640 IGKV7-3-201ENST00000357453 298 ntBASIC6.99□□□□□ -1.29
VARSP26640 RNU6-251P-201ENST00000363235 104 ntBASIC6.99□□□□□ -1.29
VARSP26640 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
VARSP26640 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
VARSP26640 SNORA70.8-201ENST00000384231 136 ntBASIC6.99□□□□□ -1.29
VARSP26640 MIR514A2-201ENST00000385131 88 ntBASIC6.99□□□□□ -1.29
VARSP26640 MIR514A3-201ENST00000385132 88 ntBASIC6.99□□□□□ -1.29
VARSP26640 RNU6-952P-201ENST00000391164 108 ntBASIC6.99□□□□□ -1.29
VARSP26640 RNU6-272P-201ENST00000411028 104 ntBASIC6.99□□□□□ -1.29
VARSP26640 AL133268.2-201ENST00000416595 430 ntTSL 3 BASIC6.99□□□□□ -1.29
VARSP26640 RPL31P12-201ENST00000422587 358 ntBASIC6.99□□□□□ -1.29
VARSP26640 GSTA6P-201ENST00000424144 582 ntBASIC6.99□□□□□ -1.29
VARSP26640 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC6.99□□□□□ -1.29
VARSP26640 AC002075.1-201ENST00000457396 676 ntBASIC6.99□□□□□ -1.29
VARSP26640 WBP1LP1-201ENST00000460451 896 ntBASIC6.99□□□□□ -1.29
VARSP26640 RPL21P99-201ENST00000480369 423 ntBASIC6.99□□□□□ -1.29
VARSP26640 AC025271.1-201ENST00000485045 429 ntBASIC6.99□□□□□ -1.29
VARSP26640 RPL21P42-201ENST00000488408 464 ntBASIC6.99□□□□□ -1.29
VARSP26640 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC6.99□□□□□ -1.29
VARSP26640 PABPC1P1-201ENST00000506347 591 ntBASIC6.99□□□□□ -1.29
VARSP26640 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC6.99□□□□□ -1.29
VARSP26640 MRPS5P3-201ENST00000515577 166 ntBASIC6.99□□□□□ -1.29
VARSP26640 RNA5SP96-201ENST00000516041 107 ntBASIC6.99□□□□□ -1.29
VARSP26640 RNU6-273P-201ENST00000516937 96 ntBASIC6.99□□□□□ -1.29
VARSP26640 SCARNA6.1-201ENST00000516989 238 ntBASIC6.99□□□□□ -1.29
VARSP26640 HMGB1P19-201ENST00000517578 577 ntBASIC6.99□□□□□ -1.29
VARSP26640 AC009812.2-201ENST00000517657 457 ntBASIC6.99□□□□□ -1.29
VARSP26640 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC6.99□□□□□ -1.29
VARSP26640 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC6.99□□□□□ -1.29
VARSP26640 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC6.99□□□□□ -1.29
VARSP26640 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC6.99□□□□□ -1.29
VARSP26640 AL589765.5-201ENST00000596133 515 ntBASIC6.99□□□□□ -1.29
VARSP26640 AL359094.1-211ENST00000608350 335 ntTSL 5 BASIC6.99□□□□□ -1.29
VARSP26640 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
VARSP26640 AL080312.2-201ENST00000613001 630 ntBASIC6.99□□□□□ -1.29
VARSP26640 AL157817.1-201ENST00000614264 790 ntBASIC6.99□□□□□ -1.29
VARSP26640 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC6.99□□□□□ -1.29
VARSP26640 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
VARSP26640 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC6.99□□□□□ -1.29
VARSP26640 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC6.99□□□□□ -1.29
VARSP26640 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
VARSP26640 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
VARSP26640 MMP10-201ENST00000279441 1758 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
VARSP26640 MTND5P19-201ENST00000424872 1794 ntBASIC6.99□□□□□ -1.29
VARSP26640 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC6.99□□□□□ -1.29
VARSP26640 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
VARSP26640 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC6.99□□□□□ -1.29
VARSP26640 PRLR-219ENST00000619676 1402 ntTSL 5 BASIC6.99□□□□□ -1.29
VARSP26640 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
VARSP26640 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
VARSP26640 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC6.99□□□□□ -1.29
VARSP26640 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
VARSP26640 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
VARSP26640 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC6.99□□□□□ -1.29
VARSP26640 AF287957.1-201ENST00000607368 1595 ntBASIC6.99□□□□□ -1.29
VARSP26640 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC6.99□□□□□ -1.29
VARSP26640 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
VARSP26640 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC6.98□□□□□ -1.29
VARSP26640 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
VARSP26640 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
VARSP26640 MEPE-208ENST00000540395 2135 ntAPPRIS ALT2 TSL 4 BASIC6.98□□□□□ -1.29
VARSP26640 AC062029.1-202ENST00000606164 3651 ntBASIC6.98□□□□□ -1.29
VARSP26640 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
VARSP26640 EFTUD1P2-201ENST00000514817 1603 ntBASIC6.98□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms