Protein–RNA interactions for Protein: P23469

PTPRE, Receptor-type tyrosine-protein phosphatase epsilon, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPREP23469 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
PTPREP23469 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
PTPREP23469 CDY19P-201ENST00000411668 1613 ntBASIC8.03□□□□□ -1.12
PTPREP23469 CDY18P-201ENST00000438294 1609 ntBASIC8.03□□□□□ -1.12
PTPREP23469 UGT2B27P-201ENST00000505092 1620 ntBASIC8.03□□□□□ -1.12
PTPREP23469 MTND5P30-201ENST00000452896 1731 ntBASIC8.03□□□□□ -1.12
PTPREP23469 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC8.03□□□□□ -1.12
PTPREP23469 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
PTPREP23469 TMEM135-202ENST00000340353 3938 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
PTPREP23469 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC8.03□□□□□ -1.12
PTPREP23469 AP003175.1-201ENST00000641383 6658 ntBASIC8.03□□□□□ -1.12
PTPREP23469 STK32B-207ENST00000512636 3272 ntTSL 5 BASIC8.03□□□□□ -1.12
PTPREP23469 TANK-205ENST00000405852 2155 ntTSL 5 BASIC8.03□□□□□ -1.12
PTPREP23469 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC8.03□□□□□ -1.12
PTPREP23469 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC8.03□□□□□ -1.12
PTPREP23469 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
PTPREP23469 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
PTPREP23469 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC8.03□□□□□ -1.12
PTPREP23469 RNU6-1040P-201ENST00000383974 107 ntBASIC8.03□□□□□ -1.12
PTPREP23469 Y_RNA.414-201ENST00000384011 101 ntBASIC8.03□□□□□ -1.12
PTPREP23469 RNU6-1109P-201ENST00000391187 107 ntBASIC8.03□□□□□ -1.12
PTPREP23469 RNU6-193P-201ENST00000410977 107 ntBASIC8.03□□□□□ -1.12
PTPREP23469 AC080125.1-201ENST00000414888 684 ntBASIC8.03□□□□□ -1.12
PTPREP23469 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC8.03□□□□□ -1.12
PTPREP23469 AC104837.2-201ENST00000427236 424 ntBASIC8.03□□□□□ -1.12
PTPREP23469 FABP5P14-201ENST00000437273 393 ntBASIC8.03□□□□□ -1.12
PTPREP23469 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC8.03□□□□□ -1.12
PTPREP23469 RPL37P3-201ENST00000456825 293 ntBASIC8.03□□□□□ -1.12
PTPREP23469 RPS26P11-201ENST00000463445 348 ntBASIC8.03□□□□□ -1.12
PTPREP23469 RPS26P6-201ENST00000475156 348 ntBASIC8.03□□□□□ -1.12
PTPREP23469 RPL21P99-201ENST00000480369 423 ntBASIC8.03□□□□□ -1.12
PTPREP23469 RPL38P3-201ENST00000484463 213 ntBASIC8.03□□□□□ -1.12
PTPREP23469 RPS4XP18-201ENST00000495480 763 ntBASIC8.03□□□□□ -1.12
PTPREP23469 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC8.03□□□□□ -1.12
PTPREP23469 IGKV2D-38-201ENST00000518423 240 ntBASIC8.03□□□□□ -1.12
PTPREP23469 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC8.03□□□□□ -1.12
PTPREP23469 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC8.03□□□□□ -1.12
PTPREP23469 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC8.03□□□□□ -1.12
PTPREP23469 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC8.03□□□□□ -1.12
PTPREP23469 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC8.03□□□□□ -1.12
PTPREP23469 AL121612.2-201ENST00000612261 482 ntBASIC8.03□□□□□ -1.12
PTPREP23469 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC8.03□□□□□ -1.12
PTPREP23469 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
PTPREP23469 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
PTPREP23469 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC8.03□□□□□ -1.12
PTPREP23469 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
PTPREP23469 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
PTPREP23469 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
PTPREP23469 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
PTPREP23469 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
PTPREP23469 AC005839.1-201ENST00000624148 3213 ntBASIC8.03□□□□□ -1.12
PTPREP23469 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
PTPREP23469 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC8.02□□□□□ -1.12
PTPREP23469 FGF9-201ENST00000382353 4220 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
PTPREP23469 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
PTPREP23469 OAT-208ENST00000539214 1864 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
PTPREP23469 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC8.02□□□□□ -1.13
PTPREP23469 AC007993.1-201ENST00000621298 2430 ntBASIC8.02□□□□□ -1.13
PTPREP23469 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
PTPREP23469 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
PTPREP23469 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
PTPREP23469 NEDD4L-207ENST00000435432 3417 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
PTPREP23469 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
PTPREP23469 LRRC37A4P-201ENST00000579913 3243 ntTSL 2 BASIC8.02□□□□□ -1.13
PTPREP23469 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
PTPREP23469 AL442128.2-201ENST00000620246 1824 ntBASIC8.02□□□□□ -1.13
PTPREP23469 RPL32P3-201ENST00000359025 275 ntBASIC8.02□□□□□ -1.13
PTPREP23469 RNA5SP308-201ENST00000362532 115 ntBASIC8.02□□□□□ -1.13
PTPREP23469 Y_RNA.291-201ENST00000364886 113 ntBASIC8.02□□□□□ -1.13
PTPREP23469 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC8.02□□□□□ -1.13
PTPREP23469 Y_RNA.396-201ENST00000383949 103 ntBASIC8.02□□□□□ -1.13
PTPREP23469 MIR506-201ENST00000384998 124 ntBASIC8.02□□□□□ -1.13
PTPREP23469 AL360271.1-201ENST00000395679 510 ntBASIC8.02□□□□□ -1.13
PTPREP23469 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC8.02□□□□□ -1.13
PTPREP23469 AL139184.1-202ENST00000422303 222 ntBASIC8.02□□□□□ -1.13
PTPREP23469 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC8.02□□□□□ -1.13
PTPREP23469 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC8.02□□□□□ -1.13
PTPREP23469 AC091390.2-201ENST00000432573 374 ntBASIC8.02□□□□□ -1.13
PTPREP23469 PRPF38AP1-201ENST00000451976 933 ntBASIC8.02□□□□□ -1.13
PTPREP23469 H3F3AP3-201ENST00000497682 407 ntBASIC8.02□□□□□ -1.13
PTPREP23469 PSMA2P2-201ENST00000504319 686 ntBASIC8.02□□□□□ -1.13
PTPREP23469 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC8.02□□□□□ -1.13
PTPREP23469 HMGB1P23-201ENST00000518743 568 ntBASIC8.02□□□□□ -1.13
PTPREP23469 AC090572.1-201ENST00000519251 160 ntBASIC8.02□□□□□ -1.13
PTPREP23469 AC022616.3-201ENST00000523940 148 ntBASIC8.02□□□□□ -1.13
PTPREP23469 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC8.02□□□□□ -1.13
PTPREP23469 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC8.02□□□□□ -1.13
PTPREP23469 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC8.02□□□□□ -1.13
PTPREP23469 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC8.02□□□□□ -1.13
PTPREP23469 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC8.02□□□□□ -1.13
PTPREP23469 MIR4271-201ENST00000582451 67 ntBASIC8.02□□□□□ -1.13
PTPREP23469 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC8.02□□□□□ -1.13
PTPREP23469 AC004805.2-201ENST00000605382 482 ntBASIC8.02□□□□□ -1.13
PTPREP23469 AC006157.1-201ENST00000611750 366 ntBASIC8.02□□□□□ -1.13
PTPREP23469 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC8.02□□□□□ -1.13
PTPREP23469 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
PTPREP23469 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
PTPREP23469 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
PTPREP23469 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
PTPREP23469 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms