Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.5□□□□□ -1.69
SMIM28A0A1B0GU29 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SMIM28A0A1B0GU29 Y_RNA.126-201ENST00000363382 111 ntBASIC4.5□□□□□ -1.69
SMIM28A0A1B0GU29 MT-RNR1-201ENST00000389680 954 ntBASIC4.5□□□□□ -1.69
SMIM28A0A1B0GU29 RNU11-4P-201ENST00000391149 133 ntBASIC4.5□□□□□ -1.69
SMIM28A0A1B0GU29 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SMIM28A0A1B0GU29 AC004448.2-201ENST00000422360 586 ntBASIC4.5□□□□□ -1.69
SMIM28A0A1B0GU29 AC106901.1-201ENST00000425086 698 ntBASIC4.5□□□□□ -1.69
SMIM28A0A1B0GU29 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.5□□□□□ -1.69
SMIM28A0A1B0GU29 XKRYP6-201ENST00000440468 1116 ntBASIC4.5□□□□□ -1.69
SMIM28A0A1B0GU29 XKRYP3-201ENST00000442113 1116 ntBASIC4.5□□□□□ -1.69
SMIM28A0A1B0GU29 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC4.5□□□□□ -1.69
SMIM28A0A1B0GU29 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.5□□□□□ -1.69
SMIM28A0A1B0GU29 HMGN1P8-201ENST00000463578 288 ntBASIC4.5□□□□□ -1.69
SMIM28A0A1B0GU29 AC105918.1-201ENST00000474399 838 ntBASIC4.5□□□□□ -1.69
SMIM28A0A1B0GU29 DEFB109F-201ENST00000491870 277 ntBASIC4.5□□□□□ -1.69
SMIM28A0A1B0GU29 RN7SL604P-201ENST00000492589 296 ntBASIC4.5□□□□□ -1.69
SMIM28A0A1B0GU29 AGGF1P3-201ENST00000493675 1213 ntBASIC4.5□□□□□ -1.69
SMIM28A0A1B0GU29 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.5□□□□□ -1.69
SMIM28A0A1B0GU29 AC108064.1-201ENST00000513791 460 ntBASIC4.5□□□□□ -1.69
SMIM28A0A1B0GU29 RN7SKP34-201ENST00000516142 244 ntBASIC4.5□□□□□ -1.69
SMIM28A0A1B0GU29 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.5□□□□□ -1.69
SMIM28A0A1B0GU29 AL121839.1-201ENST00000556233 1185 ntBASIC4.5□□□□□ -1.69
SMIM28A0A1B0GU29 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.5□□□□□ -1.69
SMIM28A0A1B0GU29 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.5□□□□□ -1.69
SMIM28A0A1B0GU29 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.5□□□□□ -1.69
SMIM28A0A1B0GU29 RNU4-89P-201ENST00000607443 133 ntBASIC4.5□□□□□ -1.69
SMIM28A0A1B0GU29 AL159169.2-201ENST00000610061 1269 ntBASIC4.5□□□□□ -1.69
SMIM28A0A1B0GU29 MIR7151-201ENST00000617477 60 ntBASIC4.5□□□□□ -1.69
SMIM28A0A1B0GU29 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC4.5□□□□□ -1.69
SMIM28A0A1B0GU29 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SMIM28A0A1B0GU29 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SMIM28A0A1B0GU29 RLIMP1-201ENST00000339626 1680 ntBASIC4.5□□□□□ -1.69
SMIM28A0A1B0GU29 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
SMIM28A0A1B0GU29 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
SMIM28A0A1B0GU29 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
SMIM28A0A1B0GU29 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.49□□□□□ -1.69
SMIM28A0A1B0GU29 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.49□□□□□ -1.69
SMIM28A0A1B0GU29 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
SMIM28A0A1B0GU29 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
SMIM28A0A1B0GU29 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
SMIM28A0A1B0GU29 OR11H4-201ENST00000315409 1082 ntBASIC4.49□□□□□ -1.69
SMIM28A0A1B0GU29 RNU1-15P-201ENST00000353977 144 ntBASIC4.49□□□□□ -1.69
SMIM28A0A1B0GU29 RNU6-697P-201ENST00000363348 107 ntBASIC4.49□□□□□ -1.69
SMIM28A0A1B0GU29 RNA5SP283-201ENST00000365604 119 ntBASIC4.49□□□□□ -1.69
SMIM28A0A1B0GU29 PPIAP31-201ENST00000405422 495 ntBASIC4.49□□□□□ -1.69
SMIM28A0A1B0GU29 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.49□□□□□ -1.69
SMIM28A0A1B0GU29 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.49□□□□□ -1.69
SMIM28A0A1B0GU29 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC4.49□□□□□ -1.69
SMIM28A0A1B0GU29 SETP10-201ENST00000424368 814 ntBASIC4.49□□□□□ -1.69
SMIM28A0A1B0GU29 AC073335.1-201ENST00000427776 363 ntBASIC4.49□□□□□ -1.69
SMIM28A0A1B0GU29 AL117339.2-201ENST00000430475 180 ntBASIC4.49□□□□□ -1.69
SMIM28A0A1B0GU29 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.49□□□□□ -1.69
SMIM28A0A1B0GU29 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.49□□□□□ -1.69
SMIM28A0A1B0GU29 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.49□□□□□ -1.69
SMIM28A0A1B0GU29 AC006326.1-201ENST00000445465 787 ntBASIC4.49□□□□□ -1.69
SMIM28A0A1B0GU29 PSMC1P13-201ENST00000458195 985 ntBASIC4.49□□□□□ -1.69
SMIM28A0A1B0GU29 RPL7AP28-201ENST00000464513 571 ntBASIC4.49□□□□□ -1.69
SMIM28A0A1B0GU29 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SMIM28A0A1B0GU29 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC4.49□□□□□ -1.69
SMIM28A0A1B0GU29 AC093824.1-201ENST00000508796 343 ntBASIC4.49□□□□□ -1.69
SMIM28A0A1B0GU29 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
SMIM28A0A1B0GU29 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.49□□□□□ -1.69
SMIM28A0A1B0GU29 DYNLL1P4-201ENST00000549314 266 ntBASIC4.49□□□□□ -1.69
SMIM28A0A1B0GU29 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.49□□□□□ -1.69
SMIM28A0A1B0GU29 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC4.49□□□□□ -1.69
SMIM28A0A1B0GU29 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.49□□□□□ -1.69
SMIM28A0A1B0GU29 OR51C1P-201ENST00000608504 942 ntBASIC4.49□□□□□ -1.69
SMIM28A0A1B0GU29 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.49□□□□□ -1.69
SMIM28A0A1B0GU29 AL122125.1-201ENST00000616999 600 ntBASIC4.49□□□□□ -1.69
SMIM28A0A1B0GU29 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
SMIM28A0A1B0GU29 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SMIM28A0A1B0GU29 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
SMIM28A0A1B0GU29 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
SMIM28A0A1B0GU29 AC019072.1-201ENST00000604535 1551 ntBASIC4.48□□□□□ -1.69
SMIM28A0A1B0GU29 AL606537.1-201ENST00000607258 2011 ntBASIC4.48□□□□□ -1.69
SMIM28A0A1B0GU29 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SMIM28A0A1B0GU29 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
SMIM28A0A1B0GU29 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SMIM28A0A1B0GU29 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
SMIM28A0A1B0GU29 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
SMIM28A0A1B0GU29 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
SMIM28A0A1B0GU29 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SMIM28A0A1B0GU29 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SMIM28A0A1B0GU29 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SMIM28A0A1B0GU29 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
SMIM28A0A1B0GU29 AC067945.1-201ENST00000342609 618 ntBASIC4.48□□□□□ -1.69
SMIM28A0A1B0GU29 RNU6-670P-201ENST00000364312 104 ntBASIC4.48□□□□□ -1.69
SMIM28A0A1B0GU29 AL672167.2-201ENST00000377164 879 ntBASIC4.48□□□□□ -1.69
SMIM28A0A1B0GU29 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SMIM28A0A1B0GU29 SKP1P3-201ENST00000429280 487 ntBASIC4.48□□□□□ -1.69
SMIM28A0A1B0GU29 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC4.48□□□□□ -1.69
SMIM28A0A1B0GU29 ARL4AP3-201ENST00000441452 574 ntBASIC4.48□□□□□ -1.69
SMIM28A0A1B0GU29 AC006011.1-201ENST00000442758 349 ntBASIC4.48□□□□□ -1.69
SMIM28A0A1B0GU29 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.48□□□□□ -1.69
SMIM28A0A1B0GU29 C1DP3-201ENST00000455013 423 ntBASIC4.48□□□□□ -1.69
SMIM28A0A1B0GU29 HPRT1P2-201ENST00000505250 544 ntBASIC4.48□□□□□ -1.69
SMIM28A0A1B0GU29 AC026402.1-201ENST00000513642 170 ntBASIC4.48□□□□□ -1.69
SMIM28A0A1B0GU29 AC134698.5-201ENST00000519444 336 ntBASIC4.48□□□□□ -1.69
SMIM28A0A1B0GU29 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms