Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC6.18□□□□□ -1.42
SHANK2Q9UPX8 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC6.18□□□□□ -1.42
SHANK2Q9UPX8 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC6.18□□□□□ -1.42
SHANK2Q9UPX8 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SHANK2Q9UPX8 KRT19P6-201ENST00000510983 209 ntBASIC6.18□□□□□ -1.42
SHANK2Q9UPX8 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC6.18□□□□□ -1.42
SHANK2Q9UPX8 AC120057.2-201ENST00000571520 271 ntBASIC6.18□□□□□ -1.42
SHANK2Q9UPX8 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC6.18□□□□□ -1.42
SHANK2Q9UPX8 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC6.18□□□□□ -1.42
SHANK2Q9UPX8 AC107993.1-201ENST00000591343 684 ntBASIC6.18□□□□□ -1.42
SHANK2Q9UPX8 AL121890.2-201ENST00000617644 465 ntBASIC6.18□□□□□ -1.42
SHANK2Q9UPX8 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SHANK2Q9UPX8 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SHANK2Q9UPX8 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
SHANK2Q9UPX8 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC6.17□□□□□ -1.42
SHANK2Q9UPX8 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
SHANK2Q9UPX8 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SHANK2Q9UPX8 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC6.17□□□□□ -1.42
SHANK2Q9UPX8 SNORA60-201ENST00000362396 134 ntBASIC6.17□□□□□ -1.42
SHANK2Q9UPX8 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SHANK2Q9UPX8 OR5BE1P-201ENST00000425977 939 ntBASIC6.17□□□□□ -1.42
SHANK2Q9UPX8 RALGAPA1P1-201ENST00000443361 6232 ntBASIC6.17□□□□□ -1.42
SHANK2Q9UPX8 MORF4L2P1-201ENST00000503761 858 ntBASIC6.17□□□□□ -1.42
SHANK2Q9UPX8 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC6.17□□□□□ -1.42
SHANK2Q9UPX8 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SHANK2Q9UPX8 RN7SKP46-201ENST00000515942 234 ntBASIC6.17□□□□□ -1.42
SHANK2Q9UPX8 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC6.17□□□□□ -1.42
SHANK2Q9UPX8 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC6.17□□□□□ -1.42
SHANK2Q9UPX8 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC6.17□□□□□ -1.42
SHANK2Q9UPX8 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC6.17□□□□□ -1.42
SHANK2Q9UPX8 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC6.17□□□□□ -1.42
SHANK2Q9UPX8 OR5BE1P-202ENST00000641168 1176 ntBASIC6.17□□□□□ -1.42
SHANK2Q9UPX8 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SHANK2Q9UPX8 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SHANK2Q9UPX8 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SHANK2Q9UPX8 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC6.16□□□□□ -1.42
SHANK2Q9UPX8 TMX2P1-201ENST00000436507 708 ntBASIC6.16□□□□□ -1.42
SHANK2Q9UPX8 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC6.16□□□□□ -1.42
SHANK2Q9UPX8 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC6.16□□□□□ -1.42
SHANK2Q9UPX8 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC6.16□□□□□ -1.42
SHANK2Q9UPX8 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC6.16□□□□□ -1.42
SHANK2Q9UPX8 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC6.16□□□□□ -1.42
SHANK2Q9UPX8 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC6.16□□□□□ -1.42
SHANK2Q9UPX8 AL442067.2-201ENST00000614033 363 ntBASIC6.16□□□□□ -1.42
SHANK2Q9UPX8 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC6.16□□□□□ -1.42
SHANK2Q9UPX8 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC6.16□□□□□ -1.42
SHANK2Q9UPX8 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SHANK2Q9UPX8 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SHANK2Q9UPX8 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC6.16□□□□□ -1.42
SHANK2Q9UPX8 CASC19-284ENST00000642142 1868 ntBASIC6.16□□□□□ -1.42
SHANK2Q9UPX8 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC6.16□□□□□ -1.42
SHANK2Q9UPX8 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC6.16□□□□□ -1.42
SHANK2Q9UPX8 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC6.16□□□□□ -1.42
SHANK2Q9UPX8 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC6.16□□□□□ -1.42
SHANK2Q9UPX8 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SHANK2Q9UPX8 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
SHANK2Q9UPX8 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC6.15□□□□□ -1.42
SHANK2Q9UPX8 AC104978.1-201ENST00000449387 391 ntBASIC6.15□□□□□ -1.42
SHANK2Q9UPX8 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC6.15□□□□□ -1.42
SHANK2Q9UPX8 PLGLA-201ENST00000465668 449 ntBASIC6.15□□□□□ -1.42
SHANK2Q9UPX8 GAPDHP36-201ENST00000480688 918 ntBASIC6.15□□□□□ -1.42
SHANK2Q9UPX8 AC110792.1-201ENST00000491826 472 ntBASIC6.15□□□□□ -1.42
SHANK2Q9UPX8 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC6.15□□□□□ -1.42
SHANK2Q9UPX8 CAB39P1-201ENST00000502277 460 ntBASIC6.15□□□□□ -1.42
SHANK2Q9UPX8 RNU6-352P-201ENST00000516908 107 ntBASIC6.15□□□□□ -1.42
SHANK2Q9UPX8 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC6.15□□□□□ -1.42
SHANK2Q9UPX8 AC037471.2-201ENST00000564941 598 ntBASIC6.15□□□□□ -1.42
SHANK2Q9UPX8 AL592436.1-201ENST00000605135 558 ntBASIC6.15□□□□□ -1.42
SHANK2Q9UPX8 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC6.15□□□□□ -1.42
SHANK2Q9UPX8 AL138721.1-201ENST00000616756 179 ntBASIC6.15□□□□□ -1.42
SHANK2Q9UPX8 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SHANK2Q9UPX8 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SHANK2Q9UPX8 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
SHANK2Q9UPX8 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SHANK2Q9UPX8 AC024560.2-201ENST00000507981 1497 ntBASIC6.15□□□□□ -1.43
SHANK2Q9UPX8 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC6.15□□□□□ -1.43
SHANK2Q9UPX8 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
SHANK2Q9UPX8 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC6.15□□□□□ -1.43
SHANK2Q9UPX8 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
SHANK2Q9UPX8 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC6.15□□□□□ -1.43
SHANK2Q9UPX8 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC6.15□□□□□ -1.43
SHANK2Q9UPX8 RPS11P1-201ENST00000451072 473 ntBASIC6.15□□□□□ -1.43
SHANK2Q9UPX8 NANOGP10-201ENST00000453325 895 ntBASIC6.15□□□□□ -1.43
SHANK2Q9UPX8 RPL29P14-201ENST00000495837 428 ntBASIC6.15□□□□□ -1.43
SHANK2Q9UPX8 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC6.15□□□□□ -1.43
SHANK2Q9UPX8 PHBP17-201ENST00000528576 541 ntBASIC6.15□□□□□ -1.43
SHANK2Q9UPX8 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC6.15□□□□□ -1.43
SHANK2Q9UPX8 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC6.15□□□□□ -1.43
SHANK2Q9UPX8 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC6.15□□□□□ -1.43
SHANK2Q9UPX8 PACRG-211ENST00000621363 360 ntTSL 5 BASIC6.15□□□□□ -1.43
SHANK2Q9UPX8 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC6.15□□□□□ -1.43
SHANK2Q9UPX8 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
SHANK2Q9UPX8 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
SHANK2Q9UPX8 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SHANK2Q9UPX8 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SHANK2Q9UPX8 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SHANK2Q9UPX8 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
SHANK2Q9UPX8 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
SHANK2Q9UPX8 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
SHANK2Q9UPX8 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms