Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
KRTAP3-3Q9BYR6 IL36RN-202ENST00000393200 2700 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
KRTAP3-3Q9BYR6 PKMP2-201ENST00000412159 1677 ntBASIC5.04□□□□□ -1.6
KRTAP3-3Q9BYR6 YOD1-201ENST00000315927 6265 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
KRTAP3-3Q9BYR6 RAI14-220ENST00000512629 2941 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
KRTAP3-3Q9BYR6 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
KRTAP3-3Q9BYR6 NUTM1-202ENST00000438749 3922 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
KRTAP3-3Q9BYR6 DCX-205ENST00000488120 2476 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
KRTAP3-3Q9BYR6 AC006946.2-201ENST00000608373 2855 ntBASIC5.04□□□□□ -1.6
KRTAP3-3Q9BYR6 SEC16A-204ENST00000313084 3073 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
KRTAP3-3Q9BYR6 EXT2-203ENST00000395673 3454 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
KRTAP3-3Q9BYR6 OGDH-206ENST00000447398 3474 ntTSL 5 BASIC5.04□□□□□ -1.6
KRTAP3-3Q9BYR6 AL109976.1-201ENST00000621919 5678 ntBASIC5.04□□□□□ -1.6
KRTAP3-3Q9BYR6 LMOD3-202ENST00000475434 2238 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
KRTAP3-3Q9BYR6 AC002384.1-203ENST00000602761 3049 ntTSL 3 BASIC5.04□□□□□ -1.6
KRTAP3-3Q9BYR6 AP004782.1-201ENST00000623990 3433 ntBASIC5.04□□□□□ -1.6
KRTAP3-3Q9BYR6 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
KRTAP3-3Q9BYR6 POTEI-201ENST00000451531 7020 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
KRTAP3-3Q9BYR6 MTR-205ENST00000535889 10405 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
KRTAP3-3Q9BYR6 PTPRK-221ENST00000532331 5757 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
KRTAP3-3Q9BYR6 MED22-208ENST00000610672 4367 ntAPPRIS P4 TSL 2 BASIC5.04□□□□□ -1.6
KRTAP3-3Q9BYR6 ETV1-206ENST00000405218 3391 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
KRTAP3-3Q9BYR6 TRIM39-203ENST00000396547 3187 ntAPPRIS P4 TSL 1 (best) BASIC5.04□□□□□ -1.6
KRTAP3-3Q9BYR6 AC005304.2-201ENST00000580134 1982 ntBASIC5.04□□□□□ -1.6
KRTAP3-3Q9BYR6 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 RSPH10B2-201ENST00000297186 2923 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 RSPH10B-201ENST00000337579 2923 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 NRP1-208ENST00000395995 5826 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 FOLH1B-202ENST00000529567 2145 ntBASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 ABL2-204ENST00000502732 12144 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 PPIP5K1-206ENST00000381885 5596 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 ELP3-219ENST00000537665 3053 ntTSL 2 BASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 HERC2P2-201ENST00000613386 5181 ntBASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 CDCA8-202ENST00000373055 2469 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 SPATA18-201ENST00000295213 4396 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 ZNF609-201ENST00000326648 8746 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 FANCB-202ENST00000398334 3008 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 LINC01234-202ENST00000547963 2088 ntTSL 2 BASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 LAMC2-204ENST00000493293 4313 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 NEXN-202ENST00000334785 2607 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 CD160-205ENST00000616463 3388 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 CTBP2-203ENST00000337195 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 ANGEL2-202ENST00000366962 4649 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 RNF165-201ENST00000269439 7596 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 CTNNBL1-203ENST00000373473 1493 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 ITM2B-202ENST00000378565 10137 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 LARP1B-210ENST00000512292 3105 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 NLGN4X-208ENST00000538097 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 CHIC1-202ENST00000373504 6797 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 CTAGE11P-201ENST00000451540 2353 ntBASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 NFYA-201ENST00000341376 3811 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 RNU1-75P-201ENST00000347264 129 ntBASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 Y_RNA.203-201ENST00000364106 102 ntBASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 RNU6-1280P-201ENST00000365211 107 ntBASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 Y_RNA.377-201ENST00000365644 108 ntBASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 LAMTOR2-202ENST00000368304 521 ntTSL 2 BASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 MIR596-201ENST00000385091 77 ntBASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 TRBV5-5-201ENST00000390372 350 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 MANBAL-203ENST00000397150 620 ntTSL 5 BASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 ZNF35-203ENST00000399560 564 ntTSL 4 BASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 PRYP1-201ENST00000412474 445 ntBASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 MYL6P5-201ENST00000412707 459 ntBASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 PYY3-201ENST00000419078 213 ntBASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 FO393418.1-201ENST00000424761 510 ntTSL 4 BASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 AC007919.1-201ENST00000429380 217 ntBASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 CHCHD3P3-201ENST00000446783 640 ntBASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 RPL23AP28-201ENST00000448062 470 ntBASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 MYL6P2-201ENST00000450079 434 ntBASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 AL353807.2-201ENST00000456382 220 ntTSL 5 BASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 RPS26P55-201ENST00000471178 356 ntBASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 RPSAP50-201ENST00000481955 852 ntBASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 CUTA-211ENST00000488478 676 ntTSL 5 BASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 AC138781.1-201ENST00000501322 505 ntTSL 3 BASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 AC091180.2-201ENST00000502823 545 ntTSL 4 BASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 AC026787.1-201ENST00000504182 420 ntTSL 5 BASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 RNU7-172P-201ENST00000517125 64 ntBASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 HIGD1AP1-201ENST00000550979 275 ntBASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 FLJ21408-202ENST00000565060 565 ntTSL 5 BASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 GEMIN8P2-201ENST00000569855 700 ntBASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 RN7SL444P-201ENST00000578948 300 ntBASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 MIR3618-201ENST00000580330 88 ntBASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 APOC1-201ENST00000586638 425 ntTSL 3 BASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 APOC1-203ENST00000588802 553 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 APOC1-205ENST00000589781 273 ntTSL 3 BASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 AP005432.2-201ENST00000608162 586 ntBASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 AC106788.2-201ENST00000610646 107 ntBASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 AC092375.3-201ENST00000622730 106 ntBASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 AC005943.2-201ENST00000624421 148 ntBASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 AC091905.3-201ENST00000624959 234 ntBASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 TMEM55A-206ENST00000630164 171 ntTSL 5 BASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 5_8S_rRNA.5-201ENST00000638132 152 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 244.1 ms