Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 RPSAP73-201ENST00000614820 330 ntBASIC5.73□□□□□ -1.49
CDK5RAP3Q96JB5 AC108359.1-201ENST00000616451 1211 ntBASIC5.73□□□□□ -1.49
CDK5RAP3Q96JB5 MIR6886-201ENST00000619864 61 ntBASIC5.73□□□□□ -1.49
CDK5RAP3Q96JB5 AC022079.1-201ENST00000621546 602 ntBASIC5.73□□□□□ -1.49
CDK5RAP3Q96JB5 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CDK5RAP3Q96JB5 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CDK5RAP3Q96JB5 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CDK5RAP3Q96JB5 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CDK5RAP3Q96JB5 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CDK5RAP3Q96JB5 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CDK5RAP3Q96JB5 AC010329.2-201ENST00000595195 2737 ntBASIC5.73□□□□□ -1.49
CDK5RAP3Q96JB5 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.73□□□□□ -1.49
CDK5RAP3Q96JB5 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.73□□□□□ -1.49
CDK5RAP3Q96JB5 AC004817.4-201ENST00000602396 3625 ntBASIC5.73□□□□□ -1.49
CDK5RAP3Q96JB5 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
CDK5RAP3Q96JB5 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CDK5RAP3Q96JB5 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
CDK5RAP3Q96JB5 AC114947.2-201ENST00000565748 2125 ntBASIC5.72□□□□□ -1.49
CDK5RAP3Q96JB5 AC107027.3-201ENST00000565095 3473 ntBASIC5.72□□□□□ -1.49
CDK5RAP3Q96JB5 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CDK5RAP3Q96JB5 AC100871.1-201ENST00000507871 1456 ntBASIC5.72□□□□□ -1.49
CDK5RAP3Q96JB5 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CDK5RAP3Q96JB5 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.72□□□□□ -1.49
CDK5RAP3Q96JB5 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
CDK5RAP3Q96JB5 SNORA68.2-201ENST00000391263 128 ntBASIC5.72□□□□□ -1.49
CDK5RAP3Q96JB5 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.72□□□□□ -1.49
CDK5RAP3Q96JB5 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.72□□□□□ -1.49
CDK5RAP3Q96JB5 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.72□□□□□ -1.49
CDK5RAP3Q96JB5 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.72□□□□□ -1.49
CDK5RAP3Q96JB5 HMGB1P49-201ENST00000418882 569 ntBASIC5.72□□□□□ -1.49
CDK5RAP3Q96JB5 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.72□□□□□ -1.49
CDK5RAP3Q96JB5 AL590609.2-201ENST00000421430 368 ntBASIC5.72□□□□□ -1.49
CDK5RAP3Q96JB5 RAC1P8-201ENST00000427086 527 ntBASIC5.72□□□□□ -1.49
CDK5RAP3Q96JB5 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.72□□□□□ -1.49
CDK5RAP3Q96JB5 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.72□□□□□ -1.49
CDK5RAP3Q96JB5 CDY14P-201ENST00000431260 1014 ntBASIC5.72□□□□□ -1.49
CDK5RAP3Q96JB5 RPL7P34-201ENST00000433316 712 ntBASIC5.72□□□□□ -1.49
CDK5RAP3Q96JB5 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC5.72□□□□□ -1.49
CDK5RAP3Q96JB5 CDY12P-201ENST00000440679 1015 ntBASIC5.72□□□□□ -1.49
CDK5RAP3Q96JB5 CDY13P-201ENST00000445813 1015 ntBASIC5.72□□□□□ -1.49
CDK5RAP3Q96JB5 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC5.72□□□□□ -1.49
CDK5RAP3Q96JB5 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.72□□□□□ -1.49
CDK5RAP3Q96JB5 OTX2P1-201ENST00000450956 354 ntBASIC5.72□□□□□ -1.49
CDK5RAP3Q96JB5 CDY23P-201ENST00000451661 1014 ntBASIC5.72□□□□□ -1.49
CDK5RAP3Q96JB5 RPL23AP12-201ENST00000467573 473 ntBASIC5.72□□□□□ -1.49
CDK5RAP3Q96JB5 RN7SL222P-201ENST00000476452 299 ntBASIC5.72□□□□□ -1.49
CDK5RAP3Q96JB5 AC011037.1-201ENST00000483964 558 ntBASIC5.72□□□□□ -1.49
CDK5RAP3Q96JB5 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC5.72□□□□□ -1.49
CDK5RAP3Q96JB5 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC5.72□□□□□ -1.49
CDK5RAP3Q96JB5 RNA5SP230-201ENST00000517039 122 ntBASIC5.72□□□□□ -1.49
CDK5RAP3Q96JB5 MRPS36P3-201ENST00000519284 130 ntBASIC5.72□□□□□ -1.49
CDK5RAP3Q96JB5 IGLV2-28-201ENST00000520681 304 ntBASIC5.72□□□□□ -1.49
CDK5RAP3Q96JB5 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC5.72□□□□□ -1.49
CDK5RAP3Q96JB5 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.72□□□□□ -1.49
CDK5RAP3Q96JB5 AC107918.3-201ENST00000533272 382 ntBASIC5.72□□□□□ -1.49
CDK5RAP3Q96JB5 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.72□□□□□ -1.49
CDK5RAP3Q96JB5 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.72□□□□□ -1.49
CDK5RAP3Q96JB5 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC5.72□□□□□ -1.49
CDK5RAP3Q96JB5 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC5.72□□□□□ -1.49
CDK5RAP3Q96JB5 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC5.72□□□□□ -1.49
CDK5RAP3Q96JB5 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC5.72□□□□□ -1.49
CDK5RAP3Q96JB5 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.72□□□□□ -1.49
CDK5RAP3Q96JB5 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.72□□□□□ -1.49
CDK5RAP3Q96JB5 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.72□□□□□ -1.49
CDK5RAP3Q96JB5 AL020997.3-201ENST00000602843 359 ntBASIC5.72□□□□□ -1.49
CDK5RAP3Q96JB5 DUXAP3-201ENST00000603616 594 ntBASIC5.72□□□□□ -1.49
CDK5RAP3Q96JB5 AL583856.2-201ENST00000606298 543 ntBASIC5.72□□□□□ -1.49
CDK5RAP3Q96JB5 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.72□□□□□ -1.49
CDK5RAP3Q96JB5 AC092954.1-201ENST00000609121 445 ntBASIC5.72□□□□□ -1.49
CDK5RAP3Q96JB5 AC055764.2-201ENST00000610089 670 ntBASIC5.72□□□□□ -1.49
CDK5RAP3Q96JB5 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC5.72□□□□□ -1.49
CDK5RAP3Q96JB5 ZNF663P-202ENST00000641770 1131 ntBASIC5.72□□□□□ -1.49
CDK5RAP3Q96JB5 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CDK5RAP3Q96JB5 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CDK5RAP3Q96JB5 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
CDK5RAP3Q96JB5 AC092376.2-201ENST00000622621 4116 ntBASIC5.72□□□□□ -1.49
CDK5RAP3Q96JB5 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
CDK5RAP3Q96JB5 POMP-202ENST00000460403 1428 ntTSL 3 BASIC5.72□□□□□ -1.49
CDK5RAP3Q96JB5 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CDK5RAP3Q96JB5 ADAM5-202ENST00000399789 1942 ntBASIC5.72□□□□□ -1.49
CDK5RAP3Q96JB5 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.72□□□□□ -1.49
CDK5RAP3Q96JB5 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
CDK5RAP3Q96JB5 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
CDK5RAP3Q96JB5 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.49
CDK5RAP3Q96JB5 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
CDK5RAP3Q96JB5 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CDK5RAP3Q96JB5 AL590763.1-201ENST00000398297 1545 ntBASIC5.71□□□□□ -1.5
CDK5RAP3Q96JB5 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CDK5RAP3Q96JB5 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
CDK5RAP3Q96JB5 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC5.71□□□□□ -1.5
CDK5RAP3Q96JB5 RNU1-87P-201ENST00000363727 170 ntBASIC5.71□□□□□ -1.5
CDK5RAP3Q96JB5 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
CDK5RAP3Q96JB5 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CDK5RAP3Q96JB5 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CDK5RAP3Q96JB5 RN7SKP278-201ENST00000410504 342 ntBASIC5.71□□□□□ -1.5
CDK5RAP3Q96JB5 RN7SKP247-201ENST00000411094 308 ntBASIC5.71□□□□□ -1.5
CDK5RAP3Q96JB5 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.71□□□□□ -1.5
CDK5RAP3Q96JB5 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC5.71□□□□□ -1.5
CDK5RAP3Q96JB5 AL356320.2-201ENST00000417263 507 ntBASIC5.71□□□□□ -1.5
CDK5RAP3Q96JB5 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms