Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LTBQ06643 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
LTBQ06643 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
LTBQ06643 DDX43P2-201ENST00000604753 1354 ntBASIC4.65□□□□□ -1.66
LTBQ06643 AC097063.1-201ENST00000426714 1797 ntBASIC4.65□□□□□ -1.66
LTBQ06643 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.65□□□□□ -1.66
LTBQ06643 AC100778.3-201ENST00000580060 1750 ntBASIC4.65□□□□□ -1.66
LTBQ06643 AL731532.2-201ENST00000623542 1953 ntBASIC4.65□□□□□ -1.66
LTBQ06643 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
LTBQ06643 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
LTBQ06643 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
LTBQ06643 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.65□□□□□ -1.66
LTBQ06643 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.65□□□□□ -1.66
LTBQ06643 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.66
LTBQ06643 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
LTBQ06643 OR13C3-201ENST00000374781 1108 ntBASIC4.65□□□□□ -1.67
LTBQ06643 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC4.65□□□□□ -1.67
LTBQ06643 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC4.65□□□□□ -1.67
LTBQ06643 U6.112-201ENST00000384129 70 ntBASIC4.65□□□□□ -1.67
LTBQ06643 Y_RNA.472-201ENST00000384322 102 ntBASIC4.65□□□□□ -1.67
LTBQ06643 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
LTBQ06643 MCTS2P-201ENST00000394552 546 ntBASIC4.65□□□□□ -1.67
LTBQ06643 CHMP1B2P-201ENST00000399581 597 ntBASIC4.65□□□□□ -1.67
LTBQ06643 NUDT19P3-201ENST00000404698 555 ntBASIC4.65□□□□□ -1.67
LTBQ06643 AL035079.1-201ENST00000405210 287 ntBASIC4.65□□□□□ -1.67
LTBQ06643 AL390316.1-201ENST00000406279 553 ntBASIC4.65□□□□□ -1.67
LTBQ06643 U3.36-201ENST00000408418 213 ntBASIC4.65□□□□□ -1.67
LTBQ06643 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC4.65□□□□□ -1.67
LTBQ06643 AC092638.1-201ENST00000411966 1275 ntBASIC4.65□□□□□ -1.67
LTBQ06643 NPM1P40-201ENST00000412758 733 ntBASIC4.65□□□□□ -1.67
LTBQ06643 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC4.65□□□□□ -1.67
LTBQ06643 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
LTBQ06643 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC4.65□□□□□ -1.67
LTBQ06643 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.65□□□□□ -1.67
LTBQ06643 RPL17P36-201ENST00000420302 549 ntBASIC4.65□□□□□ -1.67
LTBQ06643 USP9YP9-201ENST00000429406 715 ntBASIC4.65□□□□□ -1.67
LTBQ06643 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.65□□□□□ -1.67
LTBQ06643 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC4.65□□□□□ -1.67
LTBQ06643 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.65□□□□□ -1.67
LTBQ06643 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.65□□□□□ -1.67
LTBQ06643 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC4.65□□□□□ -1.67
LTBQ06643 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.65□□□□□ -1.67
LTBQ06643 CYCSP42-201ENST00000450823 238 ntBASIC4.65□□□□□ -1.67
LTBQ06643 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
LTBQ06643 Z92846.1-201ENST00000456203 268 ntBASIC4.65□□□□□ -1.67
LTBQ06643 AC092324.1-201ENST00000468671 324 ntBASIC4.65□□□□□ -1.67
LTBQ06643 BX284632.1-201ENST00000478218 541 ntBASIC4.65□□□□□ -1.67
LTBQ06643 AC008897.1-201ENST00000494006 347 ntBASIC4.65□□□□□ -1.67
LTBQ06643 IGBP1P5-201ENST00000507524 1000 ntBASIC4.65□□□□□ -1.67
LTBQ06643 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
LTBQ06643 RN7SKP34-201ENST00000516142 244 ntBASIC4.65□□□□□ -1.67
LTBQ06643 MAL2-205ENST00000521048 575 ntTSL 4 BASIC4.65□□□□□ -1.67
LTBQ06643 LRRC6P1-201ENST00000532188 885 ntBASIC4.65□□□□□ -1.67
LTBQ06643 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.65□□□□□ -1.67
LTBQ06643 AP001804.2-201ENST00000533932 910 ntBASIC4.65□□□□□ -1.67
LTBQ06643 AP003717.3-201ENST00000544832 1180 ntBASIC4.65□□□□□ -1.67
LTBQ06643 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.65□□□□□ -1.67
LTBQ06643 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
LTBQ06643 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.65□□□□□ -1.67
LTBQ06643 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.65□□□□□ -1.67
LTBQ06643 AC008745.1-201ENST00000604064 271 ntBASIC4.65□□□□□ -1.67
LTBQ06643 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
LTBQ06643 AC123767.1-202ENST00000620407 817 ntBASIC4.65□□□□□ -1.67
LTBQ06643 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.65□□□□□ -1.67
LTBQ06643 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.65□□□□□ -1.67
LTBQ06643 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
LTBQ06643 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
LTBQ06643 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.67
LTBQ06643 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
LTBQ06643 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.65□□□□□ -1.67
LTBQ06643 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.65□□□□□ -1.67
LTBQ06643 CASC19-221ENST00000641309 1382 ntBASIC4.65□□□□□ -1.67
LTBQ06643 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
LTBQ06643 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
LTBQ06643 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
LTBQ06643 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
LTBQ06643 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
LTBQ06643 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.64□□□□□ -1.67
LTBQ06643 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.64□□□□□ -1.67
LTBQ06643 ALB-214ENST00000509063 1911 ntTSL 5 BASIC4.64□□□□□ -1.67
LTBQ06643 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
LTBQ06643 AL603750.1-201ENST00000624216 1717 ntBASIC4.64□□□□□ -1.67
LTBQ06643 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
LTBQ06643 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
LTBQ06643 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
LTBQ06643 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LTBQ06643 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
LTBQ06643 SNORA51.8-201ENST00000384234 132 ntBASIC4.64□□□□□ -1.67
LTBQ06643 HMGB1P10-201ENST00000395823 563 ntBASIC4.64□□□□□ -1.67
LTBQ06643 SFR1P1-201ENST00000403720 688 ntBASIC4.64□□□□□ -1.67
LTBQ06643 AL136310.1-201ENST00000404926 654 ntBASIC4.64□□□□□ -1.67
LTBQ06643 DUTP5-201ENST00000406790 469 ntBASIC4.64□□□□□ -1.67
LTBQ06643 RN7SKP182-201ENST00000410772 298 ntBASIC4.64□□□□□ -1.67
LTBQ06643 RNU2-22P-201ENST00000411266 212 ntBASIC4.64□□□□□ -1.67
LTBQ06643 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC4.64□□□□□ -1.67
LTBQ06643 AL008987.1-201ENST00000415528 237 ntBASIC4.64□□□□□ -1.67
LTBQ06643 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC4.64□□□□□ -1.67
LTBQ06643 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC4.64□□□□□ -1.67
LTBQ06643 QRSL1P2-201ENST00000418582 964 ntBASIC4.64□□□□□ -1.67
LTBQ06643 AC104333.2-201ENST00000422630 192 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms