Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.79□□□□□ -1.64
ACLYP53396 AC006840.1-201ENST00000623069 542 ntBASIC4.79□□□□□ -1.64
ACLYP53396 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
ACLYP53396 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
ACLYP53396 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
ACLYP53396 TTC39DP-201ENST00000416781 1688 ntBASIC4.79□□□□□ -1.64
ACLYP53396 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
ACLYP53396 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
ACLYP53396 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC4.79□□□□□ -1.64
ACLYP53396 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
ACLYP53396 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
ACLYP53396 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.79□□□□□ -1.64
ACLYP53396 MAPK10-320ENST00000641462 6696 ntBASIC4.78□□□□□ -1.64
ACLYP53396 MTCO1P22-201ENST00000604619 1360 ntBASIC4.78□□□□□ -1.64
ACLYP53396 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC4.78□□□□□ -1.64
ACLYP53396 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.78□□□□□ -1.64
ACLYP53396 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.78□□□□□ -1.64
ACLYP53396 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.78□□□□□ -1.64
ACLYP53396 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
ACLYP53396 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.78□□□□□ -1.64
ACLYP53396 SNORA71.3-201ENST00000362582 128 ntBASIC4.78□□□□□ -1.64
ACLYP53396 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
ACLYP53396 RNU6ATAC-201ENST00000408749 126 ntBASIC4.78□□□□□ -1.64
ACLYP53396 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.78□□□□□ -1.64
ACLYP53396 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.78□□□□□ -1.64
ACLYP53396 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
ACLYP53396 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.78□□□□□ -1.64
ACLYP53396 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
ACLYP53396 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.78□□□□□ -1.64
ACLYP53396 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.78□□□□□ -1.64
ACLYP53396 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
ACLYP53396 MTCYBP14-201ENST00000457471 715 ntBASIC4.78□□□□□ -1.64
ACLYP53396 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.78□□□□□ -1.64
ACLYP53396 RPL7L1P8-201ENST00000469911 741 ntBASIC4.78□□□□□ -1.64
ACLYP53396 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.78□□□□□ -1.64
ACLYP53396 OR9N1P-201ENST00000491296 333 ntBASIC4.78□□□□□ -1.64
ACLYP53396 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.78□□□□□ -1.64
ACLYP53396 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.78□□□□□ -1.64
ACLYP53396 RNA5SP73-201ENST00000516744 108 ntBASIC4.78□□□□□ -1.64
ACLYP53396 NPM1P52-201ENST00000518264 846 ntBASIC4.78□□□□□ -1.64
ACLYP53396 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.78□□□□□ -1.64
ACLYP53396 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC4.78□□□□□ -1.64
ACLYP53396 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
ACLYP53396 DPRXP4-201ENST00000578053 568 ntBASIC4.78□□□□□ -1.64
ACLYP53396 RN7SL435P-201ENST00000584418 282 ntBASIC4.78□□□□□ -1.64
ACLYP53396 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC4.78□□□□□ -1.64
ACLYP53396 FP325313.1-201ENST00000638228 703 ntBASIC4.78□□□□□ -1.64
ACLYP53396 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
ACLYP53396 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
ACLYP53396 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
ACLYP53396 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
ACLYP53396 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
ACLYP53396 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.77□□□□□ -1.65
ACLYP53396 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.77□□□□□ -1.65
ACLYP53396 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.77□□□□□ -1.65
ACLYP53396 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.77□□□□□ -1.65
ACLYP53396 Y_RNA.62-201ENST00000362840 99 ntBASIC4.77□□□□□ -1.65
ACLYP53396 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.77□□□□□ -1.65
ACLYP53396 RNU1-63P-201ENST00000383902 164 ntBASIC4.77□□□□□ -1.65
ACLYP53396 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
ACLYP53396 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
ACLYP53396 HMGB3P10-201ENST00000434734 572 ntBASIC4.77□□□□□ -1.65
ACLYP53396 MTCO3P17-201ENST00000443775 513 ntBASIC4.77□□□□□ -1.65
ACLYP53396 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC4.77□□□□□ -1.65
ACLYP53396 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
ACLYP53396 AC091564.1-201ENST00000464563 479 ntBASIC4.77□□□□□ -1.65
ACLYP53396 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
ACLYP53396 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.77□□□□□ -1.65
ACLYP53396 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.77□□□□□ -1.65
ACLYP53396 IFITM8P-201ENST00000522529 394 ntBASIC4.77□□□□□ -1.65
ACLYP53396 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.77□□□□□ -1.65
ACLYP53396 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.77□□□□□ -1.65
ACLYP53396 AP005901.4-201ENST00000577336 569 ntBASIC4.77□□□□□ -1.65
ACLYP53396 SNORD39.2-201ENST00000579995 76 ntBASIC4.77□□□□□ -1.65
ACLYP53396 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.77□□□□□ -1.65
ACLYP53396 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.77□□□□□ -1.65
ACLYP53396 AC244517.3-201ENST00000616254 1235 ntBASIC4.77□□□□□ -1.65
ACLYP53396 AC039056.2-201ENST00000622261 511 ntBASIC4.77□□□□□ -1.65
ACLYP53396 AC004777.1-201ENST00000624317 287 ntBASIC4.77□□□□□ -1.65
ACLYP53396 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
ACLYP53396 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.77□□□□□ -1.65
ACLYP53396 RLIMP2-201ENST00000427891 1563 ntBASIC4.77□□□□□ -1.65
ACLYP53396 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
ACLYP53396 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.77□□□□□ -1.65
ACLYP53396 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.77□□□□□ -1.65
ACLYP53396 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
ACLYP53396 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
ACLYP53396 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
ACLYP53396 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
ACLYP53396 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
ACLYP53396 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.76□□□□□ -1.65
ACLYP53396 AC092162.3-201ENST00000624511 1624 ntBASIC4.76□□□□□ -1.65
ACLYP53396 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
ACLYP53396 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
ACLYP53396 MIR208A-201ENST00000362287 71 ntBASIC4.76□□□□□ -1.65
ACLYP53396 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
ACLYP53396 RNU11-4P-201ENST00000391149 133 ntBASIC4.76□□□□□ -1.65
ACLYP53396 AP000357.1-201ENST00000409926 1165 ntBASIC4.76□□□□□ -1.65
ACLYP53396 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.76□□□□□ -1.65
ACLYP53396 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms