Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 METTL21EP-201ENST00000298105 713 ntBASIC4.47□□□□□ -1.69
SNX3O60493 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
SNX3O60493 RNU6-354P-201ENST00000383862 107 ntBASIC4.47□□□□□ -1.69
SNX3O60493 RNU6-610P-201ENST00000384264 107 ntBASIC4.47□□□□□ -1.69
SNX3O60493 RPL22P22-201ENST00000395439 379 ntBASIC4.47□□□□□ -1.69
SNX3O60493 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SNX3O60493 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.47□□□□□ -1.69
SNX3O60493 AC013404.1-201ENST00000413068 249 ntBASIC4.47□□□□□ -1.69
SNX3O60493 AC114755.2-201ENST00000413520 361 ntBASIC4.47□□□□□ -1.69
SNX3O60493 VTA1P1-201ENST00000414044 866 ntBASIC4.47□□□□□ -1.69
SNX3O60493 TCEA1P4-201ENST00000415066 844 ntBASIC4.47□□□□□ -1.69
SNX3O60493 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.47□□□□□ -1.69
SNX3O60493 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.47□□□□□ -1.69
SNX3O60493 AC092685.1-201ENST00000447960 1243 ntBASIC4.47□□□□□ -1.69
SNX3O60493 AL121877.1-201ENST00000453704 622 ntBASIC4.47□□□□□ -1.69
SNX3O60493 RPL10P17-201ENST00000453852 316 ntBASIC4.47□□□□□ -1.69
SNX3O60493 AC005229.2-201ENST00000456995 399 ntBASIC4.47□□□□□ -1.69
SNX3O60493 AC011411.1-201ENST00000509592 876 ntBASIC4.47□□□□□ -1.69
SNX3O60493 RNU5A-7P-201ENST00000515979 116 ntBASIC4.47□□□□□ -1.69
SNX3O60493 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC4.47□□□□□ -1.69
SNX3O60493 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC4.47□□□□□ -1.69
SNX3O60493 AC025260.1-201ENST00000548858 430 ntBASIC4.47□□□□□ -1.69
SNX3O60493 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC4.47□□□□□ -1.69
SNX3O60493 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.47□□□□□ -1.69
SNX3O60493 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.47□□□□□ -1.69
SNX3O60493 ZNF92P3-201ENST00000596594 954 ntBASIC4.47□□□□□ -1.69
SNX3O60493 AC021851.1-201ENST00000608537 1082 ntBASIC4.47□□□□□ -1.69
SNX3O60493 RNA5SP440-201ENST00000612665 119 ntBASIC4.47□□□□□ -1.69
SNX3O60493 AC004477.3-201ENST00000614061 590 ntBASIC4.47□□□□□ -1.69
SNX3O60493 AC016957.2-201ENST00000616998 848 ntBASIC4.47□□□□□ -1.69
SNX3O60493 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.47□□□□□ -1.69
SNX3O60493 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
SNX3O60493 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SNX3O60493 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.47□□□□□ -1.69
SNX3O60493 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.47□□□□□ -1.69
SNX3O60493 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
SNX3O60493 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SNX3O60493 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.47□□□□□ -1.69
SNX3O60493 AC018555.1-201ENST00000567548 1980 ntBASIC4.47□□□□□ -1.69
SNX3O60493 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.47□□□□□ -1.69
SNX3O60493 AC018529.3-201ENST00000624212 2254 ntBASIC4.47□□□□□ -1.69
SNX3O60493 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
SNX3O60493 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
SNX3O60493 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
SNX3O60493 KARSP3-201ENST00000571212 1504 ntBASIC4.46□□□□□ -1.69
SNX3O60493 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
SNX3O60493 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.46□□□□□ -1.69
SNX3O60493 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
SNX3O60493 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.46□□□□□ -1.7
SNX3O60493 IGKV7-3-201ENST00000357453 298 ntBASIC4.46□□□□□ -1.7
SNX3O60493 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SNX3O60493 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
SNX3O60493 RNA5SP306-201ENST00000411087 107 ntBASIC4.46□□□□□ -1.7
SNX3O60493 SNORA74C-2-201ENST00000411179 201 ntBASIC4.46□□□□□ -1.7
SNX3O60493 HMGB3P31-201ENST00000413333 595 ntBASIC4.46□□□□□ -1.7
SNX3O60493 JKAMPP1-201ENST00000413804 919 ntBASIC4.46□□□□□ -1.7
SNX3O60493 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.46□□□□□ -1.7
SNX3O60493 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.46□□□□□ -1.7
SNX3O60493 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC4.46□□□□□ -1.7
SNX3O60493 RPL7P11-201ENST00000437586 658 ntBASIC4.46□□□□□ -1.7
SNX3O60493 AL450263.2-201ENST00000439400 589 ntBASIC4.46□□□□□ -1.7
SNX3O60493 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.46□□□□□ -1.7
SNX3O60493 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.46□□□□□ -1.7
SNX3O60493 RPL6P5-201ENST00000445678 828 ntBASIC4.46□□□□□ -1.7
SNX3O60493 HMGN1P36-201ENST00000446623 298 ntBASIC4.46□□□□□ -1.7
SNX3O60493 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.46□□□□□ -1.7
SNX3O60493 RPL31P44-201ENST00000447680 377 ntBASIC4.46□□□□□ -1.7
SNX3O60493 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.46□□□□□ -1.7
SNX3O60493 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC4.46□□□□□ -1.7
SNX3O60493 NDUFA5P5-201ENST00000468361 342 ntBASIC4.46□□□□□ -1.7
SNX3O60493 AC094085.1-201ENST00000468914 584 ntBASIC4.46□□□□□ -1.7
SNX3O60493 RN7SL184P-201ENST00000488308 297 ntBASIC4.46□□□□□ -1.7
SNX3O60493 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC4.46□□□□□ -1.7
SNX3O60493 AC005912.1-201ENST00000495392 255 ntBASIC4.46□□□□□ -1.7
SNX3O60493 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.46□□□□□ -1.7
SNX3O60493 AC010627.1-201ENST00000503819 1294 ntBASIC4.46□□□□□ -1.7
SNX3O60493 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.46□□□□□ -1.7
SNX3O60493 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.46□□□□□ -1.7
SNX3O60493 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC4.46□□□□□ -1.7
SNX3O60493 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC4.46□□□□□ -1.7
SNX3O60493 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.46□□□□□ -1.7
SNX3O60493 AC124283.4-201ENST00000581815 456 ntBASIC4.46□□□□□ -1.7
SNX3O60493 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.46□□□□□ -1.7
SNX3O60493 MIR4691-201ENST00000583764 85 ntBASIC4.46□□□□□ -1.7
SNX3O60493 AC133794.1-201ENST00000602731 914 ntBASIC4.46□□□□□ -1.7
SNX3O60493 AL391262.2-201ENST00000622466 494 ntBASIC4.46□□□□□ -1.7
SNX3O60493 AL138955.1-201ENST00000622881 1040 ntBASIC4.46□□□□□ -1.7
SNX3O60493 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.46□□□□□ -1.7
SNX3O60493 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.46□□□□□ -1.7
SNX3O60493 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SNX3O60493 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SNX3O60493 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.46□□□□□ -1.7
SNX3O60493 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SNX3O60493 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.46□□□□□ -1.7
SNX3O60493 AC009313.2-201ENST00000417893 1941 ntBASIC4.46□□□□□ -1.7
SNX3O60493 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.46□□□□□ -1.7
SNX3O60493 MTCO1P18-201ENST00000455518 1419 ntBASIC4.46□□□□□ -1.7
SNX3O60493 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.46□□□□□ -1.7
SNX3O60493 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
SNX3O60493 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 179.9 ms