Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PRKNO60260 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PRKNO60260 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
PRKNO60260 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PRKNO60260 AL442639.1-201ENST00000625030 1899 ntBASIC4.43□□□□□ -1.7
PRKNO60260 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
PRKNO60260 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PRKNO60260 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.43□□□□□ -1.7
PRKNO60260 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
PRKNO60260 AC012618.3-205ENST00000637896 1496 ntBASIC4.43□□□□□ -1.7
PRKNO60260 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PRKNO60260 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PRKNO60260 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
PRKNO60260 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.42□□□□□ -1.7
PRKNO60260 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PRKNO60260 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.42□□□□□ -1.7
PRKNO60260 MFSD8-216ENST00000641147 4009 ntBASIC4.42□□□□□ -1.7
PRKNO60260 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.42□□□□□ -1.7
PRKNO60260 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
PRKNO60260 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
PRKNO60260 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
PRKNO60260 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PRKNO60260 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PRKNO60260 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.42□□□□□ -1.7
PRKNO60260 RNU4-7P-201ENST00000364758 141 ntBASIC4.42□□□□□ -1.7
PRKNO60260 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.42□□□□□ -1.7
PRKNO60260 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
PRKNO60260 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
PRKNO60260 U6.112-201ENST00000384129 70 ntBASIC4.42□□□□□ -1.7
PRKNO60260 HMGB1P13-201ENST00000406019 642 ntBASIC4.42□□□□□ -1.7
PRKNO60260 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.42□□□□□ -1.7
PRKNO60260 RPL26P29-201ENST00000415623 438 ntBASIC4.42□□□□□ -1.7
PRKNO60260 BX510359.2-201ENST00000417920 305 ntBASIC4.42□□□□□ -1.7
PRKNO60260 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.42□□□□□ -1.7
PRKNO60260 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.42□□□□□ -1.7
PRKNO60260 OSTCP5-201ENST00000425293 453 ntBASIC4.42□□□□□ -1.7
PRKNO60260 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.42□□□□□ -1.7
PRKNO60260 FABP7P2-201ENST00000429946 379 ntBASIC4.42□□□□□ -1.7
PRKNO60260 AL035246.1-201ENST00000433554 1255 ntBASIC4.42□□□□□ -1.7
PRKNO60260 EIF2S2P2-201ENST00000447161 982 ntBASIC4.42□□□□□ -1.7
PRKNO60260 AC002553.2-201ENST00000453217 340 ntBASIC4.42□□□□□ -1.7
PRKNO60260 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.42□□□□□ -1.7
PRKNO60260 RPL5P22-201ENST00000480199 884 ntBASIC4.42□□□□□ -1.7
PRKNO60260 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.42□□□□□ -1.7
PRKNO60260 AC011005.3-201ENST00000491624 395 ntBASIC4.42□□□□□ -1.7
PRKNO60260 ENPP7P9-201ENST00000514456 627 ntBASIC4.42□□□□□ -1.7
PRKNO60260 CDH12P4-201ENST00000517835 295 ntBASIC4.42□□□□□ -1.7
PRKNO60260 CDH12P3-201ENST00000517935 295 ntBASIC4.42□□□□□ -1.7
PRKNO60260 CDH12P1-201ENST00000518435 295 ntBASIC4.42□□□□□ -1.7
PRKNO60260 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.42□□□□□ -1.7
PRKNO60260 OR10V3P-201ENST00000525712 725 ntBASIC4.42□□□□□ -1.7
PRKNO60260 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.42□□□□□ -1.7
PRKNO60260 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.42□□□□□ -1.7
PRKNO60260 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PRKNO60260 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.42□□□□□ -1.7
PRKNO60260 LRRC34P1-201ENST00000542742 915 ntBASIC4.42□□□□□ -1.7
PRKNO60260 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.42□□□□□ -1.7
PRKNO60260 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.42□□□□□ -1.7
PRKNO60260 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.42□□□□□ -1.7
PRKNO60260 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.42□□□□□ -1.7
PRKNO60260 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.42□□□□□ -1.7
PRKNO60260 AC018618.2-201ENST00000604770 446 ntBASIC4.42□□□□□ -1.7
PRKNO60260 AC093424.1-201ENST00000604999 338 ntBASIC4.42□□□□□ -1.7
PRKNO60260 AC004232.3-201ENST00000622977 525 ntBASIC4.42□□□□□ -1.7
PRKNO60260 AC011815.3-201ENST00000624194 473 ntBASIC4.42□□□□□ -1.7
PRKNO60260 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.42□□□□□ -1.7
PRKNO60260 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.42□□□□□ -1.7
PRKNO60260 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
PRKNO60260 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PRKNO60260 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
PRKNO60260 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PRKNO60260 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PRKNO60260 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PRKNO60260 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
PRKNO60260 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.41□□□□□ -1.7
PRKNO60260 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PRKNO60260 RNA5SP505-201ENST00000364748 108 ntBASIC4.41□□□□□ -1.7
PRKNO60260 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PRKNO60260 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
PRKNO60260 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
PRKNO60260 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.41□□□□□ -1.7
PRKNO60260 AL590139.1-201ENST00000416267 400 ntBASIC4.41□□□□□ -1.7
PRKNO60260 AL449283.1-202ENST00000418249 604 ntBASIC4.41□□□□□ -1.7
PRKNO60260 MTCO3P4-201ENST00000419236 787 ntBASIC4.41□□□□□ -1.7
PRKNO60260 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.41□□□□□ -1.7
PRKNO60260 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC4.41□□□□□ -1.7
PRKNO60260 AC092447.3-201ENST00000426027 686 ntBASIC4.41□□□□□ -1.7
PRKNO60260 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.41□□□□□ -1.7
PRKNO60260 AL451139.1-201ENST00000434718 346 ntBASIC4.41□□□□□ -1.7
PRKNO60260 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.41□□□□□ -1.7
PRKNO60260 TCEA1P3-201ENST00000443005 880 ntBASIC4.41□□□□□ -1.7
PRKNO60260 AC097499.1-201ENST00000444277 208 ntBASIC4.41□□□□□ -1.7
PRKNO60260 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC4.41□□□□□ -1.7
PRKNO60260 AL358794.1-201ENST00000445689 381 ntBASIC4.41□□□□□ -1.7
PRKNO60260 AC073264.2-201ENST00000448886 166 ntBASIC4.41□□□□□ -1.7
PRKNO60260 AC079168.2-201ENST00000453977 416 ntBASIC4.41□□□□□ -1.7
PRKNO60260 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC4.41□□□□□ -1.7
PRKNO60260 RPS4XP12-201ENST00000461747 709 ntBASIC4.41□□□□□ -1.7
PRKNO60260 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.41□□□□□ -1.7
PRKNO60260 AC006967.1-201ENST00000467608 589 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 142.4 ms