Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AC023157.2-201ENST00000540596 141 ntBASIC6.85□□□□□ -1.31
USB1Q9BQ65 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC6.85□□□□□ -1.31
USB1Q9BQ65 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC6.85□□□□□ -1.31
USB1Q9BQ65 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC6.85□□□□□ -1.31
USB1Q9BQ65 AC008392.1-201ENST00000600941 437 ntTSL 2 BASIC6.85□□□□□ -1.31
USB1Q9BQ65 AL355297.3-201ENST00000604082 446 ntBASIC6.85□□□□□ -1.31
USB1Q9BQ65 AC073389.2-201ENST00000606726 571 ntTSL 4 BASIC6.85□□□□□ -1.31
USB1Q9BQ65 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC6.85□□□□□ -1.31
USB1Q9BQ65 AC009229.3-201ENST00000608056 282 ntBASIC6.85□□□□□ -1.31
USB1Q9BQ65 AL138726.1-201ENST00000614873 333 ntBASIC6.85□□□□□ -1.31
USB1Q9BQ65 AC078909.2-201ENST00000620584 398 ntBASIC6.85□□□□□ -1.31
USB1Q9BQ65 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC6.85□□□□□ -1.31
USB1Q9BQ65 AC012557.3-201ENST00000626439 255 ntBASIC6.85□□□□□ -1.31
USB1Q9BQ65 AC010653.3-201ENST00000635332 232 ntBASIC6.85□□□□□ -1.31
USB1Q9BQ65 CLEC19A-205ENST00000636231 561 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
USB1Q9BQ65 AC016582.3-206ENST00000636547 207 ntBASIC6.85□□□□□ -1.31
USB1Q9BQ65 PIAS1-201ENST00000249636 8115 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
USB1Q9BQ65 LMO7-205ENST00000377534 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
USB1Q9BQ65 AL161901.1-201ENST00000624954 3425 ntBASIC6.85□□□□□ -1.31
USB1Q9BQ65 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
USB1Q9BQ65 AL512329.1-201ENST00000404600 1592 ntBASIC6.85□□□□□ -1.31
USB1Q9BQ65 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC6.85□□□□□ -1.31
USB1Q9BQ65 LINC01630-208ENST00000635680 4363 ntTSL 5 BASIC6.85□□□□□ -1.31
USB1Q9BQ65 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
USB1Q9BQ65 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
USB1Q9BQ65 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
USB1Q9BQ65 NUP210L-202ENST00000368553 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
USB1Q9BQ65 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC6.85□□□□□ -1.31
USB1Q9BQ65 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
USB1Q9BQ65 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
USB1Q9BQ65 CTAGE3P-201ENST00000454280 2404 ntBASIC6.85□□□□□ -1.31
USB1Q9BQ65 EPHA4-203ENST00000409938 3363 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
USB1Q9BQ65 ZC3H11A-203ENST00000367212 3004 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
USB1Q9BQ65 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC6.84□□□□□ -1.31
USB1Q9BQ65 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
USB1Q9BQ65 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC6.84□□□□□ -1.31
USB1Q9BQ65 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
USB1Q9BQ65 UEVLD-205ENST00000396197 4156 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
USB1Q9BQ65 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
USB1Q9BQ65 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC6.84□□□□□ -1.31
USB1Q9BQ65 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
USB1Q9BQ65 PIGN-231ENST00000639174 4095 ntTSL 5 BASIC6.84□□□□□ -1.31
USB1Q9BQ65 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
USB1Q9BQ65 LIN9-205ENST00000481685 1916 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
USB1Q9BQ65 AC097714.1-201ENST00000511272 1647 ntBASIC6.84□□□□□ -1.31
USB1Q9BQ65 GOT2P1-201ENST00000440922 1309 ntBASIC6.84□□□□□ -1.31
USB1Q9BQ65 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
USB1Q9BQ65 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC6.84□□□□□ -1.31
USB1Q9BQ65 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
USB1Q9BQ65 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC6.84□□□□□ -1.31
USB1Q9BQ65 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC6.84□□□□□ -1.31
USB1Q9BQ65 U3.1-201ENST00000362500 215 ntBASIC6.84□□□□□ -1.31
USB1Q9BQ65 RNU6-97P-201ENST00000363387 104 ntBASIC6.84□□□□□ -1.31
USB1Q9BQ65 RNA5SP427-201ENST00000365323 119 ntBASIC6.84□□□□□ -1.31
USB1Q9BQ65 FHL1-203ENST00000370676 833 ntTSL 5 BASIC6.84□□□□□ -1.31
USB1Q9BQ65 RNA5SP18-201ENST00000390935 121 ntBASIC6.84□□□□□ -1.31
USB1Q9BQ65 AC092952.1-201ENST00000397646 1209 ntBASIC6.84□□□□□ -1.31
USB1Q9BQ65 PDCL3P5-201ENST00000398028 722 ntBASIC6.84□□□□□ -1.31
USB1Q9BQ65 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
USB1Q9BQ65 PRRC2CP1-201ENST00000404428 159 ntBASIC6.84□□□□□ -1.31
USB1Q9BQ65 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC6.84□□□□□ -1.31
USB1Q9BQ65 RN7SKP39-201ENST00000410773 322 ntBASIC6.84□□□□□ -1.31
USB1Q9BQ65 RPSAP35-201ENST00000413753 818 ntBASIC6.84□□□□□ -1.31
USB1Q9BQ65 ANAPC1P1-201ENST00000426186 2145 ntBASIC6.84□□□□□ -1.31
USB1Q9BQ65 OR2AS1P-201ENST00000427827 319 ntBASIC6.84□□□□□ -1.31
USB1Q9BQ65 HBBP1-201ENST00000433329 439 ntBASIC6.84□□□□□ -1.31
USB1Q9BQ65 RPS21P1-201ENST00000434479 247 ntBASIC6.84□□□□□ -1.31
USB1Q9BQ65 YWHAZP8-201ENST00000436935 731 ntBASIC6.84□□□□□ -1.31
USB1Q9BQ65 PA2G4P1-201ENST00000442248 1197 ntBASIC6.84□□□□□ -1.31
USB1Q9BQ65 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC6.84□□□□□ -1.31
USB1Q9BQ65 CHIAP1-201ENST00000456220 995 ntBASIC6.84□□□□□ -1.31
USB1Q9BQ65 RNU6-1132P-201ENST00000459214 107 ntBASIC6.84□□□□□ -1.31
USB1Q9BQ65 RN7SL414P-201ENST00000469545 294 ntBASIC6.84□□□□□ -1.31
USB1Q9BQ65 SYNPR-208ENST00000472899 527 ntTSL 4 BASIC6.84□□□□□ -1.31
USB1Q9BQ65 RN7SL563P-201ENST00000481233 298 ntBASIC6.84□□□□□ -1.31
USB1Q9BQ65 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC6.84□□□□□ -1.31
USB1Q9BQ65 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC6.84□□□□□ -1.31
USB1Q9BQ65 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC6.84□□□□□ -1.31
USB1Q9BQ65 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC6.84□□□□□ -1.31
USB1Q9BQ65 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC6.84□□□□□ -1.31
USB1Q9BQ65 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC6.84□□□□□ -1.31
USB1Q9BQ65 FXYD5-207ENST00000541435 898 ntAPPRIS P2 TSL 2 BASIC6.84□□□□□ -1.31
USB1Q9BQ65 RRN3P3-201ENST00000549207 578 ntBASIC6.84□□□□□ -1.31
USB1Q9BQ65 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC6.84□□□□□ -1.31
USB1Q9BQ65 PCAT29-202ENST00000558941 545 ntTSL 4 BASIC6.84□□□□□ -1.31
USB1Q9BQ65 AC027796.5-201ENST00000573568 560 ntTSL 5 BASIC6.84□□□□□ -1.31
USB1Q9BQ65 AC024267.3-201ENST00000579673 562 ntTSL 5 BASIC6.84□□□□□ -1.31
USB1Q9BQ65 AC005410.2-201ENST00000580270 463 ntTSL 3 BASIC6.84□□□□□ -1.31
USB1Q9BQ65 GLUD1P2-201ENST00000583339 201 ntBASIC6.84□□□□□ -1.31
USB1Q9BQ65 GLUD1P8-201ENST00000585063 203 ntBASIC6.84□□□□□ -1.31
USB1Q9BQ65 AC010761.6-201ENST00000587898 197 ntTSL 3 BASIC6.84□□□□□ -1.31
USB1Q9BQ65 AC140658.6-201ENST00000603958 201 ntBASIC6.84□□□□□ -1.31
USB1Q9BQ65 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC6.84□□□□□ -1.31
USB1Q9BQ65 ATP5A1P2-202ENST00000616464 443 ntBASIC6.84□□□□□ -1.31
USB1Q9BQ65 AC124319.3-201ENST00000616832 526 ntBASIC6.84□□□□□ -1.31
USB1Q9BQ65 SLC20A1P2-201ENST00000618036 966 ntBASIC6.84□□□□□ -1.31
USB1Q9BQ65 MPP6-209ENST00000625307 126 ntTSL 5 BASIC6.84□□□□□ -1.31
USB1Q9BQ65 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
USB1Q9BQ65 OR55B1P-203ENST00000641518 2602 ntBASIC6.84□□□□□ -1.31
USB1Q9BQ65 AC011755.1-201ENST00000623763 2049 ntBASIC6.84□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms