Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.12□□□□□ -1.59
HOXD13P35453 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.12□□□□□ -1.59
HOXD13P35453 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.12□□□□□ -1.59
HOXD13P35453 PCNPP1-201ENST00000552501 511 ntBASIC5.12□□□□□ -1.59
HOXD13P35453 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.12□□□□□ -1.59
HOXD13P35453 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.12□□□□□ -1.59
HOXD13P35453 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC5.12□□□□□ -1.59
HOXD13P35453 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC5.12□□□□□ -1.59
HOXD13P35453 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.12□□□□□ -1.59
HOXD13P35453 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC5.12□□□□□ -1.59
HOXD13P35453 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.12□□□□□ -1.59
HOXD13P35453 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.12□□□□□ -1.59
HOXD13P35453 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HOXD13P35453 AC123768.4-201ENST00000616244 701 ntBASIC5.12□□□□□ -1.59
HOXD13P35453 STMN1P1-201ENST00000617809 440 ntBASIC5.12□□□□□ -1.59
HOXD13P35453 AC024595.1-201ENST00000623088 387 ntBASIC5.12□□□□□ -1.59
HOXD13P35453 AC138907.10-201ENST00000623708 983 ntBASIC5.12□□□□□ -1.59
HOXD13P35453 AC020978.9-201ENST00000624380 1141 ntBASIC5.12□□□□□ -1.59
HOXD13P35453 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.12□□□□□ -1.59
HOXD13P35453 AC017007.4-201ENST00000503353 1352 ntBASIC5.12□□□□□ -1.59
HOXD13P35453 AC100871.1-201ENST00000507871 1456 ntBASIC5.12□□□□□ -1.59
HOXD13P35453 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HOXD13P35453 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HOXD13P35453 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HOXD13P35453 AC022031.1-201ENST00000585985 2593 ntBASIC5.11□□□□□ -1.59
HOXD13P35453 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.11□□□□□ -1.59
HOXD13P35453 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HOXD13P35453 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.11□□□□□ -1.59
HOXD13P35453 AC093535.2-201ENST00000624769 2326 ntBASIC5.11□□□□□ -1.59
HOXD13P35453 OR56B2P-201ENST00000317102 954 ntBASIC5.11□□□□□ -1.59
HOXD13P35453 RNU4-44P-201ENST00000363050 141 ntBASIC5.11□□□□□ -1.59
HOXD13P35453 RN7SKP224-201ENST00000364140 325 ntBASIC5.11□□□□□ -1.59
HOXD13P35453 RNVU1-6-201ENST00000364688 164 ntBASIC5.11□□□□□ -1.59
HOXD13P35453 RNA5SP151-201ENST00000365632 117 ntBASIC5.11□□□□□ -1.59
HOXD13P35453 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC5.11□□□□□ -1.59
HOXD13P35453 AL359643.1-201ENST00000404109 423 ntBASIC5.11□□□□□ -1.59
HOXD13P35453 HMGB3P18-201ENST00000406327 590 ntBASIC5.11□□□□□ -1.59
HOXD13P35453 AC019050.1-201ENST00000418508 492 ntBASIC5.11□□□□□ -1.59
HOXD13P35453 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HOXD13P35453 AC073069.1-201ENST00000428657 441 ntBASIC5.11□□□□□ -1.59
HOXD13P35453 AL049745.1-201ENST00000433953 286 ntBASIC5.11□□□□□ -1.59
HOXD13P35453 AC092447.2-201ENST00000435487 669 ntBASIC5.11□□□□□ -1.59
HOXD13P35453 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.11□□□□□ -1.59
HOXD13P35453 H2AFZP5-201ENST00000446960 382 ntBASIC5.11□□□□□ -1.59
HOXD13P35453 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC5.11□□□□□ -1.59
HOXD13P35453 AC090142.1-201ENST00000465776 462 ntBASIC5.11□□□□□ -1.59
HOXD13P35453 RPL12P20-201ENST00000475538 479 ntBASIC5.11□□□□□ -1.59
HOXD13P35453 RPL23AP37-201ENST00000479658 549 ntBASIC5.11□□□□□ -1.59
HOXD13P35453 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HOXD13P35453 AC083982.1-201ENST00000485679 344 ntBASIC5.11□□□□□ -1.59
HOXD13P35453 AC104629.1-201ENST00000494226 508 ntBASIC5.11□□□□□ -1.59
HOXD13P35453 AC025164.1-201ENST00000496249 478 ntBASIC5.11□□□□□ -1.59
HOXD13P35453 AC104108.1-201ENST00000509930 412 ntBASIC5.11□□□□□ -1.59
HOXD13P35453 HMGN1P15-201ENST00000513870 295 ntBASIC5.11□□□□□ -1.59
HOXD13P35453 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC5.11□□□□□ -1.59
HOXD13P35453 TBCA-203ENST00000517679 545 ntTSL 3 BASIC5.11□□□□□ -1.59
HOXD13P35453 AP000916.1-201ENST00000533869 835 ntBASIC5.11□□□□□ -1.59
HOXD13P35453 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.11□□□□□ -1.59
HOXD13P35453 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.11□□□□□ -1.59
HOXD13P35453 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.11□□□□□ -1.59
HOXD13P35453 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC5.11□□□□□ -1.59
HOXD13P35453 AC012254.4-201ENST00000588843 273 ntBASIC5.11□□□□□ -1.59
HOXD13P35453 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC5.11□□□□□ -1.59
HOXD13P35453 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.11□□□□□ -1.59
HOXD13P35453 AC016542.1-201ENST00000608259 493 ntBASIC5.11□□□□□ -1.59
HOXD13P35453 AC100847.1-201ENST00000611316 481 ntBASIC5.11□□□□□ -1.59
HOXD13P35453 AL049539.1-201ENST00000611964 459 ntBASIC5.11□□□□□ -1.59
HOXD13P35453 AC073569.3-201ENST00000619055 682 ntBASIC5.11□□□□□ -1.59
HOXD13P35453 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC5.11□□□□□ -1.59
HOXD13P35453 TMEM30CP-203ENST00000637814 1035 ntBASIC5.11□□□□□ -1.59
HOXD13P35453 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
HOXD13P35453 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
HOXD13P35453 KARSP3-201ENST00000571212 1504 ntBASIC5.11□□□□□ -1.59
HOXD13P35453 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.11□□□□□ -1.59
HOXD13P35453 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
HOXD13P35453 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HOXD13P35453 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
HOXD13P35453 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HOXD13P35453 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HOXD13P35453 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.1□□□□□ -1.59
HOXD13P35453 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HOXD13P35453 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
HOXD13P35453 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HOXD13P35453 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.1□□□□□ -1.59
HOXD13P35453 RPL23AP59-201ENST00000399415 461 ntBASIC5.1□□□□□ -1.59
HOXD13P35453 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC5.1□□□□□ -1.59
HOXD13P35453 RBMY2KP-201ENST00000418221 992 ntBASIC5.1□□□□□ -1.59
HOXD13P35453 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC5.1□□□□□ -1.59
HOXD13P35453 Z74021.1-201ENST00000423610 407 ntBASIC5.1□□□□□ -1.59
HOXD13P35453 RPL12P34-201ENST00000424532 479 ntBASIC5.1□□□□□ -1.59
HOXD13P35453 RPL21P43-201ENST00000425440 472 ntBASIC5.1□□□□□ -1.59
HOXD13P35453 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.1□□□□□ -1.59
HOXD13P35453 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC5.1□□□□□ -1.59
HOXD13P35453 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC5.1□□□□□ -1.59
HOXD13P35453 AC016831.4-201ENST00000438302 307 ntBASIC5.1□□□□□ -1.59
HOXD13P35453 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.1□□□□□ -1.59
HOXD13P35453 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC5.1□□□□□ -1.59
HOXD13P35453 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
HOXD13P35453 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.1□□□□□ -1.59
HOXD13P35453 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms