Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC7.82□□□□□ -1.16
CSB-PGBD3P0DP91 RNU6-1225P-201ENST00000516336 65 ntBASIC7.82□□□□□ -1.16
CSB-PGBD3P0DP91 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC7.82□□□□□ -1.16
CSB-PGBD3P0DP91 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC7.82□□□□□ -1.16
CSB-PGBD3P0DP91 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
CSB-PGBD3P0DP91 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC7.82□□□□□ -1.16
CSB-PGBD3P0DP91 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC7.82□□□□□ -1.16
CSB-PGBD3P0DP91 AC022884.3-201ENST00000579571 248 ntBASIC7.82□□□□□ -1.16
CSB-PGBD3P0DP91 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC7.82□□□□□ -1.16
CSB-PGBD3P0DP91 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
CSB-PGBD3P0DP91 AP001267.4-201ENST00000602598 545 ntBASIC7.82□□□□□ -1.16
CSB-PGBD3P0DP91 AC015871.2-201ENST00000603605 948 ntBASIC7.82□□□□□ -1.16
CSB-PGBD3P0DP91 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC7.82□□□□□ -1.16
CSB-PGBD3P0DP91 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
CSB-PGBD3P0DP91 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
CSB-PGBD3P0DP91 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
CSB-PGBD3P0DP91 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC7.82□□□□□ -1.16
CSB-PGBD3P0DP91 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
CSB-PGBD3P0DP91 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
CSB-PGBD3P0DP91 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC7.81□□□□□ -1.16
CSB-PGBD3P0DP91 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
CSB-PGBD3P0DP91 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC7.81□□□□□ -1.16
CSB-PGBD3P0DP91 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
CSB-PGBD3P0DP91 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC7.81□□□□□ -1.16
CSB-PGBD3P0DP91 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CSB-PGBD3P0DP91 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
CSB-PGBD3P0DP91 Y_RNA.535-201ENST00000384612 99 ntBASIC7.81□□□□□ -1.16
CSB-PGBD3P0DP91 RNY3P10-201ENST00000384764 102 ntBASIC7.81□□□□□ -1.16
CSB-PGBD3P0DP91 AL590002.1-201ENST00000406554 418 ntBASIC7.81□□□□□ -1.16
CSB-PGBD3P0DP91 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC7.81□□□□□ -1.16
CSB-PGBD3P0DP91 AC009237.5-201ENST00000414271 501 ntBASIC7.81□□□□□ -1.16
CSB-PGBD3P0DP91 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC7.81□□□□□ -1.16
CSB-PGBD3P0DP91 RNGTTP1-201ENST00000420965 728 ntBASIC7.81□□□□□ -1.16
CSB-PGBD3P0DP91 CYCSP11-201ENST00000436426 315 ntBASIC7.81□□□□□ -1.16
CSB-PGBD3P0DP91 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CSB-PGBD3P0DP91 RPL36AP33-201ENST00000450395 310 ntBASIC7.81□□□□□ -1.16
CSB-PGBD3P0DP91 SDC4P-201ENST00000453285 601 ntBASIC7.81□□□□□ -1.16
CSB-PGBD3P0DP91 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC7.81□□□□□ -1.16
CSB-PGBD3P0DP91 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC7.81□□□□□ -1.16
CSB-PGBD3P0DP91 AC100832.1-201ENST00000471945 383 ntBASIC7.81□□□□□ -1.16
CSB-PGBD3P0DP91 AC092989.1-201ENST00000481235 277 ntBASIC7.81□□□□□ -1.16
CSB-PGBD3P0DP91 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC7.81□□□□□ -1.16
CSB-PGBD3P0DP91 AC091951.2-201ENST00000500762 203 ntBASIC7.81□□□□□ -1.16
CSB-PGBD3P0DP91 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC7.81□□□□□ -1.16
CSB-PGBD3P0DP91 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC7.81□□□□□ -1.16
CSB-PGBD3P0DP91 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC7.81□□□□□ -1.16
CSB-PGBD3P0DP91 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC7.81□□□□□ -1.16
CSB-PGBD3P0DP91 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC7.81□□□□□ -1.16
CSB-PGBD3P0DP91 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC7.81□□□□□ -1.16
CSB-PGBD3P0DP91 SNORA20.3-201ENST00000516880 132 ntBASIC7.81□□□□□ -1.16
CSB-PGBD3P0DP91 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC7.81□□□□□ -1.16
CSB-PGBD3P0DP91 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC7.81□□□□□ -1.16
CSB-PGBD3P0DP91 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC7.81□□□□□ -1.16
CSB-PGBD3P0DP91 CA1-215ENST00000522389 551 ntTSL 3 BASIC7.81□□□□□ -1.16
CSB-PGBD3P0DP91 MRPS16P1-201ENST00000523462 412 ntBASIC7.81□□□□□ -1.16
CSB-PGBD3P0DP91 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC7.81□□□□□ -1.16
CSB-PGBD3P0DP91 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC7.81□□□□□ -1.16
CSB-PGBD3P0DP91 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CSB-PGBD3P0DP91 AC090578.1-201ENST00000604955 591 ntBASIC7.81□□□□□ -1.16
CSB-PGBD3P0DP91 AL121655.1-201ENST00000605811 308 ntBASIC7.81□□□□□ -1.16
CSB-PGBD3P0DP91 AL390208.1-201ENST00000605885 644 ntBASIC7.81□□□□□ -1.16
CSB-PGBD3P0DP91 Xist_exon4.1-201ENST00000615964 126 ntBASIC7.81□□□□□ -1.16
CSB-PGBD3P0DP91 AL136221.1-201ENST00000621449 509 ntBASIC7.81□□□□□ -1.16
CSB-PGBD3P0DP91 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
CSB-PGBD3P0DP91 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC7.81□□□□□ -1.16
CSB-PGBD3P0DP91 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC7.81□□□□□ -1.16
CSB-PGBD3P0DP91 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
CSB-PGBD3P0DP91 AC006210.2-201ENST00000367074 1545 ntBASIC7.81□□□□□ -1.16
CSB-PGBD3P0DP91 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CSB-PGBD3P0DP91 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC7.81□□□□□ -1.16
CSB-PGBD3P0DP91 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC7.81□□□□□ -1.16
CSB-PGBD3P0DP91 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
CSB-PGBD3P0DP91 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
CSB-PGBD3P0DP91 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
CSB-PGBD3P0DP91 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC7.8□□□□□ -1.16
CSB-PGBD3P0DP91 PABPC1P6-201ENST00000445594 1829 ntBASIC7.8□□□□□ -1.16
CSB-PGBD3P0DP91 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
CSB-PGBD3P0DP91 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CSB-PGBD3P0DP91 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC7.8□□□□□ -1.16
CSB-PGBD3P0DP91 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
CSB-PGBD3P0DP91 CDC27P2-201ENST00000425026 1922 ntBASIC7.8□□□□□ -1.16
CSB-PGBD3P0DP91 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CSB-PGBD3P0DP91 AC007842.1-201ENST00000597336 2039 ntBASIC7.8□□□□□ -1.16
CSB-PGBD3P0DP91 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
CSB-PGBD3P0DP91 AL353743.4-201ENST00000422653 1547 ntBASIC7.8□□□□□ -1.16
CSB-PGBD3P0DP91 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC7.8□□□□□ -1.16
CSB-PGBD3P0DP91 RNU4-12P-201ENST00000365233 139 ntBASIC7.8□□□□□ -1.16
CSB-PGBD3P0DP91 RNU6-348P-201ENST00000384386 107 ntBASIC7.8□□□□□ -1.16
CSB-PGBD3P0DP91 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
CSB-PGBD3P0DP91 OR2W4P-201ENST00000406496 926 ntBASIC7.8□□□□□ -1.16
CSB-PGBD3P0DP91 BLOC1S2P1-201ENST00000428431 301 ntBASIC7.8□□□□□ -1.16
CSB-PGBD3P0DP91 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC7.8□□□□□ -1.16
CSB-PGBD3P0DP91 AC104306.1-201ENST00000449702 371 ntBASIC7.8□□□□□ -1.16
CSB-PGBD3P0DP91 FRG2FP-204ENST00000453982 852 ntBASIC7.8□□□□□ -1.16
CSB-PGBD3P0DP91 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC7.8□□□□□ -1.16
CSB-PGBD3P0DP91 RN7SL826P-201ENST00000479724 288 ntBASIC7.8□□□□□ -1.16
CSB-PGBD3P0DP91 RN7SL727P-201ENST00000482164 296 ntBASIC7.8□□□□□ -1.16
CSB-PGBD3P0DP91 AC008953.1-201ENST00000497334 318 ntBASIC7.8□□□□□ -1.16
CSB-PGBD3P0DP91 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC7.8□□□□□ -1.16
CSB-PGBD3P0DP91 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC7.8□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 130.4 ms