Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.44□□□□□ -1.54
CCDC78A2IDD5 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
CCDC78A2IDD5 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.44□□□□□ -1.54
CCDC78A2IDD5 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.44□□□□□ -1.54
CCDC78A2IDD5 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC78A2IDD5 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC78A2IDD5 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.44□□□□□ -1.54
CCDC78A2IDD5 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.44□□□□□ -1.54
CCDC78A2IDD5 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC78A2IDD5 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC78A2IDD5 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC78A2IDD5 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC78A2IDD5 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC78A2IDD5 AL078621.3-201ENST00000623707 2042 ntBASIC5.43□□□□□ -1.54
CCDC78A2IDD5 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC78A2IDD5 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC78A2IDD5 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.43□□□□□ -1.54
CCDC78A2IDD5 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
CCDC78A2IDD5 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
CCDC78A2IDD5 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC78A2IDD5 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC78A2IDD5 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
CCDC78A2IDD5 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC78A2IDD5 RNA5SP234-201ENST00000363916 119 ntBASIC5.43□□□□□ -1.54
CCDC78A2IDD5 Y_RNA.194-201ENST00000363985 102 ntBASIC5.43□□□□□ -1.54
CCDC78A2IDD5 RNU6-452P-201ENST00000384406 107 ntBASIC5.43□□□□□ -1.54
CCDC78A2IDD5 AL121978.1-201ENST00000402778 359 ntBASIC5.43□□□□□ -1.54
CCDC78A2IDD5 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC5.43□□□□□ -1.54
CCDC78A2IDD5 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.43□□□□□ -1.54
CCDC78A2IDD5 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC5.43□□□□□ -1.54
CCDC78A2IDD5 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC5.43□□□□□ -1.54
CCDC78A2IDD5 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC78A2IDD5 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.43□□□□□ -1.54
CCDC78A2IDD5 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC5.43□□□□□ -1.54
CCDC78A2IDD5 RPS27AP8-201ENST00000452665 445 ntBASIC5.43□□□□□ -1.54
CCDC78A2IDD5 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.43□□□□□ -1.54
CCDC78A2IDD5 RPL35AP19-201ENST00000469425 329 ntBASIC5.43□□□□□ -1.54
CCDC78A2IDD5 SYPL1P1-201ENST00000473622 768 ntBASIC5.43□□□□□ -1.54
CCDC78A2IDD5 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC5.43□□□□□ -1.54
CCDC78A2IDD5 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.43□□□□□ -1.54
CCDC78A2IDD5 MTND3P5-201ENST00000512798 333 ntBASIC5.43□□□□□ -1.54
CCDC78A2IDD5 AC108471.1-201ENST00000513977 287 ntBASIC5.43□□□□□ -1.54
CCDC78A2IDD5 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC5.43□□□□□ -1.54
CCDC78A2IDD5 AC092709.1-201ENST00000521355 1045 ntBASIC5.43□□□□□ -1.54
CCDC78A2IDD5 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.43□□□□□ -1.54
CCDC78A2IDD5 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.43□□□□□ -1.54
CCDC78A2IDD5 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
CCDC78A2IDD5 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.43□□□□□ -1.54
CCDC78A2IDD5 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC5.43□□□□□ -1.54
CCDC78A2IDD5 ELOCP32-201ENST00000548625 324 ntBASIC5.43□□□□□ -1.54
CCDC78A2IDD5 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.43□□□□□ -1.54
CCDC78A2IDD5 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.43□□□□□ -1.54
CCDC78A2IDD5 DUXAP1-201ENST00000556632 463 ntBASIC5.43□□□□□ -1.54
CCDC78A2IDD5 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC5.43□□□□□ -1.54
CCDC78A2IDD5 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.43□□□□□ -1.54
CCDC78A2IDD5 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC5.43□□□□□ -1.54
CCDC78A2IDD5 AC022884.3-201ENST00000579571 248 ntBASIC5.43□□□□□ -1.54
CCDC78A2IDD5 MIR1273E-201ENST00000581165 102 ntBASIC5.43□□□□□ -1.54
CCDC78A2IDD5 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC5.43□□□□□ -1.54
CCDC78A2IDD5 AC006272.2-201ENST00000594725 163 ntBASIC5.43□□□□□ -1.54
CCDC78A2IDD5 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.43□□□□□ -1.54
CCDC78A2IDD5 AC013244.1-201ENST00000604279 193 ntBASIC5.43□□□□□ -1.54
CCDC78A2IDD5 OR2AS2P-201ENST00000606902 342 ntBASIC5.43□□□□□ -1.54
CCDC78A2IDD5 AC099676.1-201ENST00000608886 657 ntBASIC5.43□□□□□ -1.54
CCDC78A2IDD5 AC244107.2-201ENST00000611773 76 ntBASIC5.43□□□□□ -1.54
CCDC78A2IDD5 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.43□□□□□ -1.54
CCDC78A2IDD5 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
CCDC78A2IDD5 ZNF663P-202ENST00000641770 1131 ntBASIC5.43□□□□□ -1.54
CCDC78A2IDD5 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.43□□□□□ -1.54
CCDC78A2IDD5 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC78A2IDD5 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC78A2IDD5 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.43□□□□□ -1.54
CCDC78A2IDD5 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC78A2IDD5 AC083843.2-201ENST00000568248 6253 ntBASIC5.43□□□□□ -1.54
CCDC78A2IDD5 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.43□□□□□ -1.54
CCDC78A2IDD5 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC78A2IDD5 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC78A2IDD5 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC78A2IDD5 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.42□□□□□ -1.54
CCDC78A2IDD5 CASC19-248ENST00000641674 1356 ntBASIC5.42□□□□□ -1.54
CCDC78A2IDD5 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.42□□□□□ -1.54
CCDC78A2IDD5 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.42□□□□□ -1.54
CCDC78A2IDD5 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC78A2IDD5 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC78A2IDD5 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC78A2IDD5 RNU6-560P-201ENST00000364007 108 ntBASIC5.42□□□□□ -1.54
CCDC78A2IDD5 RNU4-4P-201ENST00000364588 130 ntBASIC5.42□□□□□ -1.54
CCDC78A2IDD5 RNU6-185P-201ENST00000384421 107 ntBASIC5.42□□□□□ -1.54
CCDC78A2IDD5 RNU6-225P-201ENST00000384613 103 ntBASIC5.42□□□□□ -1.54
CCDC78A2IDD5 RNU1-77P-201ENST00000390868 162 ntBASIC5.42□□□□□ -1.54
CCDC78A2IDD5 Y_RNA.599-201ENST00000410489 109 ntBASIC5.42□□□□□ -1.54
CCDC78A2IDD5 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC5.42□□□□□ -1.54
CCDC78A2IDD5 TAF13P2-201ENST00000416876 286 ntBASIC5.42□□□□□ -1.54
CCDC78A2IDD5 AC027644.1-201ENST00000419595 298 ntBASIC5.42□□□□□ -1.54
CCDC78A2IDD5 SRSF1P1-201ENST00000424058 520 ntBASIC5.42□□□□□ -1.54
CCDC78A2IDD5 OR5AW1P-201ENST00000426334 1006 ntBASIC5.42□□□□□ -1.54
CCDC78A2IDD5 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC5.42□□□□□ -1.54
CCDC78A2IDD5 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.42□□□□□ -1.54
CCDC78A2IDD5 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.42□□□□□ -1.54
CCDC78A2IDD5 MTCO1P52-201ENST00000433928 531 ntBASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms