Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC9.02□□□□□ -0.97
PHF8Q9UPP1 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC9.02□□□□□ -0.97
PHF8Q9UPP1 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
PHF8Q9UPP1 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC9.02□□□□□ -0.97
PHF8Q9UPP1 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC9.02□□□□□ -0.97
PHF8Q9UPP1 AC006213.1-202ENST00000589021 2176 ntTSL 2 BASIC9.02□□□□□ -0.97
PHF8Q9UPP1 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
PHF8Q9UPP1 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
PHF8Q9UPP1 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC9.02□□□□□ -0.97
PHF8Q9UPP1 XRCC6P5-201ENST00000435236 1795 ntBASIC9.01□□□□□ -0.97
PHF8Q9UPP1 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC9.01□□□□□ -0.97
PHF8Q9UPP1 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC9.01□□□□□ -0.97
PHF8Q9UPP1 MID1-204ENST00000380782 3352 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
PHF8Q9UPP1 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC9.01□□□□□ -0.97
PHF8Q9UPP1 TATDN2P3-201ENST00000452855 3665 ntBASIC9.01□□□□□ -0.97
PHF8Q9UPP1 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC9.01□□□□□ -0.97
PHF8Q9UPP1 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC9.01□□□□□ -0.97
PHF8Q9UPP1 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
PHF8Q9UPP1 AC089998.1-201ENST00000548575 3141 ntBASIC9.01□□□□□ -0.97
PHF8Q9UPP1 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC9.01□□□□□ -0.97
PHF8Q9UPP1 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
PHF8Q9UPP1 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
PHF8Q9UPP1 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
PHF8Q9UPP1 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC9.01□□□□□ -0.97
PHF8Q9UPP1 CD163-203ENST00000432237 3701 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
PHF8Q9UPP1 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC9.01□□□□□ -0.97
PHF8Q9UPP1 OFD1P5Y-201ENST00000447585 2590 ntBASIC9.01□□□□□ -0.97
PHF8Q9UPP1 LCA5-201ENST00000369846 4542 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
PHF8Q9UPP1 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
PHF8Q9UPP1 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
PHF8Q9UPP1 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
PHF8Q9UPP1 PRELID1P2-201ENST00000407805 396 ntBASIC9.01□□□□□ -0.97
PHF8Q9UPP1 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC9.01□□□□□ -0.97
PHF8Q9UPP1 AC006020.1-201ENST00000420179 1854 ntBASIC9.01□□□□□ -0.97
PHF8Q9UPP1 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC9.01□□□□□ -0.97
PHF8Q9UPP1 MTND5P27-201ENST00000428871 1720 ntBASIC9.01□□□□□ -0.97
PHF8Q9UPP1 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
PHF8Q9UPP1 AC073109.1-201ENST00000445066 978 ntBASIC9.01□□□□□ -0.97
PHF8Q9UPP1 AC097463.1-201ENST00000447288 481 ntBASIC9.01□□□□□ -0.97
PHF8Q9UPP1 RPL31P44-201ENST00000447680 377 ntBASIC9.01□□□□□ -0.97
PHF8Q9UPP1 HMGB3P22-202ENST00000451823 572 ntBASIC9.01□□□□□ -0.97
PHF8Q9UPP1 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC9.01□□□□□ -0.97
PHF8Q9UPP1 RPL12P30-201ENST00000488389 499 ntBASIC9.01□□□□□ -0.97
PHF8Q9UPP1 NUP58P1-201ENST00000502546 1738 ntBASIC9.01□□□□□ -0.97
PHF8Q9UPP1 SNX18P24-201ENST00000505249 671 ntBASIC9.01□□□□□ -0.97
PHF8Q9UPP1 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC9.01□□□□□ -0.97
PHF8Q9UPP1 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC9.01□□□□□ -0.97
PHF8Q9UPP1 SCARNA21.2-201ENST00000516600 166 ntBASIC9.01□□□□□ -0.97
PHF8Q9UPP1 RNU6-789P-201ENST00000517105 102 ntBASIC9.01□□□□□ -0.97
PHF8Q9UPP1 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC9.01□□□□□ -0.97
PHF8Q9UPP1 AC027544.3-201ENST00000535082 757 ntBASIC9.01□□□□□ -0.97
PHF8Q9UPP1 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC9.01□□□□□ -0.97
PHF8Q9UPP1 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC9.01□□□□□ -0.97
PHF8Q9UPP1 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC9.01□□□□□ -0.97
PHF8Q9UPP1 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
PHF8Q9UPP1 POLR2KP1-201ENST00000553226 168 ntBASIC9.01□□□□□ -0.97
PHF8Q9UPP1 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC9.01□□□□□ -0.97
PHF8Q9UPP1 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC9.01□□□□□ -0.97
PHF8Q9UPP1 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC9.01□□□□□ -0.97
PHF8Q9UPP1 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC9.01□□□□□ -0.97
PHF8Q9UPP1 AC008507.3-201ENST00000585753 472 ntBASIC9.01□□□□□ -0.97
PHF8Q9UPP1 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC9.01□□□□□ -0.97
PHF8Q9UPP1 AC008521.2-201ENST00000591021 259 ntBASIC9.01□□□□□ -0.97
PHF8Q9UPP1 AC083806.3-201ENST00000614016 455 ntBASIC9.01□□□□□ -0.97
PHF8Q9UPP1 AC005899.7-201ENST00000618199 588 ntBASIC9.01□□□□□ -0.97
PHF8Q9UPP1 AC131649.2-201ENST00000624925 4439 ntBASIC9.01□□□□□ -0.97
PHF8Q9UPP1 SVEP1-202ENST00000374469 12194 ntAPPRIS P2 TSL 5 BASIC9.01□□□□□ -0.97
PHF8Q9UPP1 ZNF271P-201ENST00000399070 5124 ntTSL 2 BASIC9.01□□□□□ -0.97
PHF8Q9UPP1 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
PHF8Q9UPP1 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
PHF8Q9UPP1 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
PHF8Q9UPP1 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC9.01□□□□□ -0.97
PHF8Q9UPP1 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
PHF8Q9UPP1 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
PHF8Q9UPP1 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
PHF8Q9UPP1 AC079949.2-201ENST00000617117 2933 ntBASIC9.01□□□□□ -0.97
PHF8Q9UPP1 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
PHF8Q9UPP1 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC9□□□□□ -0.97
PHF8Q9UPP1 MID1-212ENST00000616003 1926 ntTSL 1 (best) BASIC9□□□□□ -0.97
PHF8Q9UPP1 AC008555.1-201ENST00000561778 2757 ntBASIC9□□□□□ -0.97
PHF8Q9UPP1 PPP2R2B-202ENST00000394409 10704 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
PHF8Q9UPP1 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC9□□□□□ -0.97
PHF8Q9UPP1 RNU6-1097P-201ENST00000363586 107 ntBASIC9□□□□□ -0.97
PHF8Q9UPP1 RNU6-777P-201ENST00000364265 104 ntBASIC9□□□□□ -0.97
PHF8Q9UPP1 RNU6-108P-201ENST00000365558 107 ntBASIC9□□□□□ -0.97
PHF8Q9UPP1 RPL7P25-201ENST00000404151 721 ntBASIC9□□□□□ -0.97
PHF8Q9UPP1 AL121834.1-202ENST00000404494 277 ntBASIC9□□□□□ -0.97
PHF8Q9UPP1 RNU2-9P-201ENST00000410194 145 ntBASIC9□□□□□ -0.97
PHF8Q9UPP1 RNA5SP498-201ENST00000411342 120 ntBASIC9□□□□□ -0.97
PHF8Q9UPP1 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC9□□□□□ -0.97
PHF8Q9UPP1 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC9□□□□□ -0.97
PHF8Q9UPP1 SUMO2P7-201ENST00000511179 285 ntBASIC9□□□□□ -0.97
PHF8Q9UPP1 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC9□□□□□ -0.97
PHF8Q9UPP1 RNU6-201P-201ENST00000517100 61 ntBASIC9□□□□□ -0.97
PHF8Q9UPP1 OR5D15P-201ENST00000531671 942 ntBASIC9□□□□□ -0.97
PHF8Q9UPP1 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC9□□□□□ -0.97
PHF8Q9UPP1 MIR3167-201ENST00000579623 85 ntBASIC9□□□□□ -0.97
PHF8Q9UPP1 UBE2L4-201ENST00000587688 464 ntBASIC9□□□□□ -0.97
PHF8Q9UPP1 AC011445.2-201ENST00000599274 173 ntBASIC9□□□□□ -0.97
PHF8Q9UPP1 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC9□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms