Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 KLHL2-209ENST00000514860 2442 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.34
COL25A1Q9BXS0 TMC5-208ENST00000564959 2434 ntTSL 2 BASIC6.71□□□□□ -1.34
COL25A1Q9BXS0 FCGR3B-202ENST00000367964 2143 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
COL25A1Q9BXS0 TMEM87A-202ENST00000389834 3109 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
COL25A1Q9BXS0 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC6.71□□□□□ -1.34
COL25A1Q9BXS0 ELMO2-202ENST00000352077 2157 ntAPPRIS ALT1 TSL 5 BASIC6.71□□□□□ -1.34
COL25A1Q9BXS0 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.71□□□□□ -1.34
COL25A1Q9BXS0 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC6.71□□□□□ -1.34
COL25A1Q9BXS0 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
COL25A1Q9BXS0 AC087501.5-201ENST00000607496 2374 ntBASIC6.71□□□□□ -1.34
COL25A1Q9BXS0 AC010894.3-201ENST00000442996 2400 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
COL25A1Q9BXS0 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
COL25A1Q9BXS0 RAB11A-201ENST00000261890 4930 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
COL25A1Q9BXS0 ZNF415-213ENST00000597503 2469 ntTSL 2 BASIC6.7□□□□□ -1.34
COL25A1Q9BXS0 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC6.7□□□□□ -1.34
COL25A1Q9BXS0 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
COL25A1Q9BXS0 CYP4A11-201ENST00000310638 2530 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
COL25A1Q9BXS0 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
COL25A1Q9BXS0 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
COL25A1Q9BXS0 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC6.7□□□□□ -1.34
COL25A1Q9BXS0 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
COL25A1Q9BXS0 Y_RNA.291-201ENST00000364886 113 ntBASIC6.7□□□□□ -1.34
COL25A1Q9BXS0 RNU6-1032P-201ENST00000384100 107 ntBASIC6.7□□□□□ -1.34
COL25A1Q9BXS0 RNU6-831P-201ENST00000384548 107 ntBASIC6.7□□□□□ -1.34
COL25A1Q9BXS0 Y_RNA.527-201ENST00000384573 102 ntBASIC6.7□□□□□ -1.34
COL25A1Q9BXS0 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
COL25A1Q9BXS0 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
COL25A1Q9BXS0 RN7SKP121-201ENST00000410842 305 ntBASIC6.7□□□□□ -1.34
COL25A1Q9BXS0 RNU6-1304P-201ENST00000411374 106 ntBASIC6.7□□□□□ -1.34
COL25A1Q9BXS0 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC6.7□□□□□ -1.34
COL25A1Q9BXS0 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC6.7□□□□□ -1.34
COL25A1Q9BXS0 AC083875.1-201ENST00000419509 405 ntBASIC6.7□□□□□ -1.34
COL25A1Q9BXS0 IGKV1OR9-1-201ENST00000424370 284 ntBASIC6.7□□□□□ -1.34
COL25A1Q9BXS0 BX323845.3-201ENST00000428215 527 ntBASIC6.7□□□□□ -1.34
COL25A1Q9BXS0 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC6.7□□□□□ -1.34
COL25A1Q9BXS0 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC6.7□□□□□ -1.34
COL25A1Q9BXS0 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC6.7□□□□□ -1.34
COL25A1Q9BXS0 RPL7P52-201ENST00000449200 742 ntBASIC6.7□□□□□ -1.34
COL25A1Q9BXS0 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.7□□□□□ -1.34
COL25A1Q9BXS0 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC6.7□□□□□ -1.34
COL25A1Q9BXS0 RNU7-157P-201ENST00000459600 66 ntBASIC6.7□□□□□ -1.34
COL25A1Q9BXS0 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
COL25A1Q9BXS0 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.7□□□□□ -1.34
COL25A1Q9BXS0 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC6.7□□□□□ -1.34
COL25A1Q9BXS0 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC6.7□□□□□ -1.34
COL25A1Q9BXS0 AP000676.2-201ENST00000529711 301 ntBASIC6.7□□□□□ -1.34
COL25A1Q9BXS0 AP002812.4-201ENST00000532139 286 ntBASIC6.7□□□□□ -1.34
COL25A1Q9BXS0 OR4C7P-201ENST00000533375 919 ntBASIC6.7□□□□□ -1.34
COL25A1Q9BXS0 AC068587.4-201ENST00000533893 186 ntBASIC6.7□□□□□ -1.34
COL25A1Q9BXS0 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC6.7□□□□□ -1.34
COL25A1Q9BXS0 APOOP3-201ENST00000536787 586 ntBASIC6.7□□□□□ -1.34
COL25A1Q9BXS0 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.7□□□□□ -1.34
COL25A1Q9BXS0 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC6.7□□□□□ -1.34
COL25A1Q9BXS0 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC6.7□□□□□ -1.34
COL25A1Q9BXS0 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC6.7□□□□□ -1.34
COL25A1Q9BXS0 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC6.7□□□□□ -1.34
COL25A1Q9BXS0 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC6.7□□□□□ -1.34
COL25A1Q9BXS0 AC009318.4-201ENST00000620496 486 ntBASIC6.7□□□□□ -1.34
COL25A1Q9BXS0 AC073488.9-201ENST00000631601 754 ntBASIC6.7□□□□□ -1.34
COL25A1Q9BXS0 MIR193BHG-214ENST00000641765 509 ntBASIC6.7□□□□□ -1.34
COL25A1Q9BXS0 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
COL25A1Q9BXS0 CFAP61-205ENST00000377306 2017 ntTSL 5 BASIC6.7□□□□□ -1.34
COL25A1Q9BXS0 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC6.7□□□□□ -1.34
COL25A1Q9BXS0 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
COL25A1Q9BXS0 AC025574.1-201ENST00000554784 1653 ntBASIC6.7□□□□□ -1.34
COL25A1Q9BXS0 AL139805.2-201ENST00000455305 2433 ntBASIC6.7□□□□□ -1.34
COL25A1Q9BXS0 CLK1-201ENST00000321356 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
COL25A1Q9BXS0 MAPK6PS2-201ENST00000379571 2060 ntBASIC6.7□□□□□ -1.34
COL25A1Q9BXS0 MAPK10-298ENST00000641297 3040 ntAPPRIS P2 BASIC6.7□□□□□ -1.34
COL25A1Q9BXS0 CYP8B1-201ENST00000316161 3974 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
COL25A1Q9BXS0 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC6.7□□□□□ -1.34
COL25A1Q9BXS0 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC6.7□□□□□ -1.34
COL25A1Q9BXS0 AC006378.2-201ENST00000623178 2476 ntBASIC6.7□□□□□ -1.34
COL25A1Q9BXS0 SLC9A9-201ENST00000316549 3627 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
COL25A1Q9BXS0 AC022400.3-201ENST00000399449 3810 ntTSL 5 BASIC6.7□□□□□ -1.34
COL25A1Q9BXS0 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.7□□□□□ -1.34
COL25A1Q9BXS0 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC6.7□□□□□ -1.34
COL25A1Q9BXS0 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC6.7□□□□□ -1.34
COL25A1Q9BXS0 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
COL25A1Q9BXS0 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
COL25A1Q9BXS0 ESRG-201ENST00000583516 3140 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
COL25A1Q9BXS0 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
COL25A1Q9BXS0 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC6.69□□□□□ -1.34
COL25A1Q9BXS0 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC6.69□□□□□ -1.34
COL25A1Q9BXS0 LINC00269-201ENST00000399711 2173 ntTSL 2 BASIC6.69□□□□□ -1.34
COL25A1Q9BXS0 IL31RA-206ENST00000447346 2577 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
COL25A1Q9BXS0 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.69□□□□□ -1.34
COL25A1Q9BXS0 TCL6-201ENST00000352367 3398 ntTSL 2 BASIC6.69□□□□□ -1.34
COL25A1Q9BXS0 FRMPD2-213ENST00000636244 4194 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
COL25A1Q9BXS0 SLC24A1-212ENST00000546330 3246 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
COL25A1Q9BXS0 DIP2B-201ENST00000301180 8593 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
COL25A1Q9BXS0 MECOM-208ENST00000468789 3691 ntAPPRIS P3 TSL 2 BASIC6.69□□□□□ -1.34
COL25A1Q9BXS0 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
COL25A1Q9BXS0 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
COL25A1Q9BXS0 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
COL25A1Q9BXS0 CYCSP17-201ENST00000407870 315 ntBASIC6.69□□□□□ -1.34
COL25A1Q9BXS0 AC062016.2-201ENST00000420950 676 ntBASIC6.69□□□□□ -1.34
COL25A1Q9BXS0 HSPE1P1-201ENST00000421494 318 ntBASIC6.69□□□□□ -1.34
COL25A1Q9BXS0 AL953862.1-201ENST00000423016 168 ntBASIC6.69□□□□□ -1.34
COL25A1Q9BXS0 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 134.9 ms