Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 AC022861.1-201ENST00000522981 663 ntBASIC6.82□□□□□ -1.32
LYSMD3Q7Z3D4 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
LYSMD3Q7Z3D4 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC6.82□□□□□ -1.32
LYSMD3Q7Z3D4 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC6.82□□□□□ -1.32
LYSMD3Q7Z3D4 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
LYSMD3Q7Z3D4 RPL3P13-201ENST00000550415 216 ntBASIC6.82□□□□□ -1.32
LYSMD3Q7Z3D4 SNRPGP18-201ENST00000553000 214 ntBASIC6.82□□□□□ -1.32
LYSMD3Q7Z3D4 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC6.82□□□□□ -1.32
LYSMD3Q7Z3D4 FAM106CP-201ENST00000582212 507 ntBASIC6.82□□□□□ -1.32
LYSMD3Q7Z3D4 POLR3GP2-201ENST00000588366 668 ntBASIC6.82□□□□□ -1.32
LYSMD3Q7Z3D4 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC6.82□□□□□ -1.32
LYSMD3Q7Z3D4 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC6.82□□□□□ -1.32
LYSMD3Q7Z3D4 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC6.82□□□□□ -1.32
LYSMD3Q7Z3D4 AC131009.3-201ENST00000621809 287 ntBASIC6.82□□□□□ -1.32
LYSMD3Q7Z3D4 AL133216.2-202ENST00000634512 349 ntBASIC6.82□□□□□ -1.32
LYSMD3Q7Z3D4 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC6.82□□□□□ -1.32
LYSMD3Q7Z3D4 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC6.82□□□□□ -1.32
LYSMD3Q7Z3D4 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
LYSMD3Q7Z3D4 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
LYSMD3Q7Z3D4 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
LYSMD3Q7Z3D4 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
LYSMD3Q7Z3D4 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC6.81□□□□□ -1.32
LYSMD3Q7Z3D4 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.81□□□□□ -1.32
LYSMD3Q7Z3D4 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC6.81□□□□□ -1.32
LYSMD3Q7Z3D4 ZNF658B-201ENST00000602828 3408 ntBASIC6.81□□□□□ -1.32
LYSMD3Q7Z3D4 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
LYSMD3Q7Z3D4 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
LYSMD3Q7Z3D4 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC6.81□□□□□ -1.32
LYSMD3Q7Z3D4 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
LYSMD3Q7Z3D4 AC073343.1-201ENST00000328239 651 ntBASIC6.81□□□□□ -1.32
LYSMD3Q7Z3D4 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC6.81□□□□□ -1.32
LYSMD3Q7Z3D4 Y_RNA.28-201ENST00000362554 111 ntBASIC6.81□□□□□ -1.32
LYSMD3Q7Z3D4 RNA5SP65-201ENST00000363166 119 ntBASIC6.81□□□□□ -1.32
LYSMD3Q7Z3D4 Y_RNA.197-201ENST00000364004 102 ntBASIC6.81□□□□□ -1.32
LYSMD3Q7Z3D4 RN7SKP130-201ENST00000364924 301 ntBASIC6.81□□□□□ -1.32
LYSMD3Q7Z3D4 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
LYSMD3Q7Z3D4 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
LYSMD3Q7Z3D4 RNY4P36-201ENST00000391116 96 ntBASIC6.81□□□□□ -1.32
LYSMD3Q7Z3D4 RNA5SP105-201ENST00000391123 113 ntBASIC6.81□□□□□ -1.32
LYSMD3Q7Z3D4 AL592114.1-201ENST00000403842 483 ntBASIC6.81□□□□□ -1.32
LYSMD3Q7Z3D4 CYCSP17-201ENST00000407870 315 ntBASIC6.81□□□□□ -1.32
LYSMD3Q7Z3D4 RN7SKP266-201ENST00000410232 287 ntBASIC6.81□□□□□ -1.32
LYSMD3Q7Z3D4 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC6.81□□□□□ -1.32
LYSMD3Q7Z3D4 AC092634.6-201ENST00000418558 192 ntBASIC6.81□□□□□ -1.32
LYSMD3Q7Z3D4 COX6CP17-201ENST00000421389 185 ntBASIC6.81□□□□□ -1.32
LYSMD3Q7Z3D4 RPL34P3-201ENST00000421454 338 ntBASIC6.81□□□□□ -1.32
LYSMD3Q7Z3D4 AC000089.1-201ENST00000424559 801 ntBASIC6.81□□□□□ -1.32
LYSMD3Q7Z3D4 RPS7P14-201ENST00000426405 583 ntBASIC6.81□□□□□ -1.32
LYSMD3Q7Z3D4 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC6.81□□□□□ -1.32
LYSMD3Q7Z3D4 AL022324.2-201ENST00000434827 780 ntBASIC6.81□□□□□ -1.32
LYSMD3Q7Z3D4 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC6.81□□□□□ -1.32
LYSMD3Q7Z3D4 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC6.81□□□□□ -1.32
LYSMD3Q7Z3D4 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC6.81□□□□□ -1.32
LYSMD3Q7Z3D4 AC006335.2-201ENST00000437993 330 ntBASIC6.81□□□□□ -1.32
LYSMD3Q7Z3D4 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC6.81□□□□□ -1.32
LYSMD3Q7Z3D4 UBE2V1P5-201ENST00000440070 405 ntBASIC6.81□□□□□ -1.32
LYSMD3Q7Z3D4 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC6.81□□□□□ -1.32
LYSMD3Q7Z3D4 TCEA1P1-201ENST00000449716 880 ntBASIC6.81□□□□□ -1.32
LYSMD3Q7Z3D4 CEACAMP4-201ENST00000457676 421 ntBASIC6.81□□□□□ -1.32
LYSMD3Q7Z3D4 RN7SL372P-201ENST00000461982 298 ntBASIC6.81□□□□□ -1.32
LYSMD3Q7Z3D4 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.81□□□□□ -1.32
LYSMD3Q7Z3D4 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.81□□□□□ -1.32
LYSMD3Q7Z3D4 EIF4EP3-201ENST00000498782 656 ntBASIC6.81□□□□□ -1.32
LYSMD3Q7Z3D4 RPL38P4-201ENST00000502376 214 ntBASIC6.81□□□□□ -1.32
LYSMD3Q7Z3D4 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
LYSMD3Q7Z3D4 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.81□□□□□ -1.32
LYSMD3Q7Z3D4 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC6.81□□□□□ -1.32
LYSMD3Q7Z3D4 AC006499.2-201ENST00000513470 337 ntBASIC6.81□□□□□ -1.32
LYSMD3Q7Z3D4 SNORA25.17-201ENST00000517184 124 ntBASIC6.81□□□□□ -1.32
LYSMD3Q7Z3D4 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC6.81□□□□□ -1.32
LYSMD3Q7Z3D4 RNU6-988P-201ENST00000519081 107 ntBASIC6.81□□□□□ -1.32
LYSMD3Q7Z3D4 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC6.81□□□□□ -1.32
LYSMD3Q7Z3D4 GTF2IP11-201ENST00000526931 420 ntBASIC6.81□□□□□ -1.32
LYSMD3Q7Z3D4 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC6.81□□□□□ -1.32
LYSMD3Q7Z3D4 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
LYSMD3Q7Z3D4 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC6.81□□□□□ -1.32
LYSMD3Q7Z3D4 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC6.81□□□□□ -1.32
LYSMD3Q7Z3D4 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
LYSMD3Q7Z3D4 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC6.81□□□□□ -1.32
LYSMD3Q7Z3D4 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC6.81□□□□□ -1.32
LYSMD3Q7Z3D4 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC6.81□□□□□ -1.32
LYSMD3Q7Z3D4 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC6.81□□□□□ -1.32
LYSMD3Q7Z3D4 AL590032.1-201ENST00000604920 252 ntBASIC6.81□□□□□ -1.32
LYSMD3Q7Z3D4 uc_338.22-201ENST00000622722 187 ntBASIC6.81□□□□□ -1.32
LYSMD3Q7Z3D4 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.81□□□□□ -1.32
LYSMD3Q7Z3D4 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC6.81□□□□□ -1.32
LYSMD3Q7Z3D4 ZNF806-201ENST00000438300 1774 ntBASIC6.81□□□□□ -1.32
LYSMD3Q7Z3D4 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC6.81□□□□□ -1.32
LYSMD3Q7Z3D4 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC6.81□□□□□ -1.32
LYSMD3Q7Z3D4 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
LYSMD3Q7Z3D4 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
LYSMD3Q7Z3D4 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC6.81□□□□□ -1.32
LYSMD3Q7Z3D4 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC6.81□□□□□ -1.32
LYSMD3Q7Z3D4 RACGAP1P-201ENST00000550663 1879 ntBASIC6.81□□□□□ -1.32
LYSMD3Q7Z3D4 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC6.81□□□□□ -1.32
LYSMD3Q7Z3D4 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
LYSMD3Q7Z3D4 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC6.81□□□□□ -1.32
LYSMD3Q7Z3D4 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC6.81□□□□□ -1.32
LYSMD3Q7Z3D4 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
LYSMD3Q7Z3D4 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms