Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
NHLRC1Q6VVB1 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
NHLRC1Q6VVB1 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
NHLRC1Q6VVB1 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
NHLRC1Q6VVB1 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.4□□□□□ -1.71
NHLRC1Q6VVB1 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.39□□□□□ -1.71
NHLRC1Q6VVB1 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.39□□□□□ -1.71
NHLRC1Q6VVB1 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NHLRC1Q6VVB1 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NHLRC1Q6VVB1 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NHLRC1Q6VVB1 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.39□□□□□ -1.71
NHLRC1Q6VVB1 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NHLRC1Q6VVB1 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.39□□□□□ -1.71
NHLRC1Q6VVB1 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.39□□□□□ -1.71
NHLRC1Q6VVB1 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
NHLRC1Q6VVB1 HSPA8P18-201ENST00000439846 1928 ntBASIC4.39□□□□□ -1.71
NHLRC1Q6VVB1 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NHLRC1Q6VVB1 LINC01355-201ENST00000566551 5444 ntBASIC4.39□□□□□ -1.71
NHLRC1Q6VVB1 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
NHLRC1Q6VVB1 RNU1-87P-201ENST00000363727 170 ntBASIC4.39□□□□□ -1.71
NHLRC1Q6VVB1 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
NHLRC1Q6VVB1 SNORA40.4-201ENST00000390971 128 ntBASIC4.39□□□□□ -1.71
NHLRC1Q6VVB1 DNAJC19P6-201ENST00000401853 280 ntBASIC4.39□□□□□ -1.71
NHLRC1Q6VVB1 MTATP6P31-201ENST00000406985 692 ntBASIC4.39□□□□□ -1.71
NHLRC1Q6VVB1 RN7SKP278-201ENST00000410504 342 ntBASIC4.39□□□□□ -1.71
NHLRC1Q6VVB1 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.39□□□□□ -1.71
NHLRC1Q6VVB1 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.39□□□□□ -1.71
NHLRC1Q6VVB1 AL627308.1-201ENST00000435693 821 ntBASIC4.39□□□□□ -1.71
NHLRC1Q6VVB1 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC4.39□□□□□ -1.71
NHLRC1Q6VVB1 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.39□□□□□ -1.71
NHLRC1Q6VVB1 AC073850.1-201ENST00000449243 255 ntBASIC4.39□□□□□ -1.71
NHLRC1Q6VVB1 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.39□□□□□ -1.71
NHLRC1Q6VVB1 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC4.39□□□□□ -1.71
NHLRC1Q6VVB1 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
NHLRC1Q6VVB1 NIP7P2-201ENST00000485801 544 ntBASIC4.39□□□□□ -1.71
NHLRC1Q6VVB1 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.39□□□□□ -1.71
NHLRC1Q6VVB1 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.39□□□□□ -1.71
NHLRC1Q6VVB1 AC121161.1-201ENST00000510606 652 ntBASIC4.39□□□□□ -1.71
NHLRC1Q6VVB1 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC4.39□□□□□ -1.71
NHLRC1Q6VVB1 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC4.39□□□□□ -1.71
NHLRC1Q6VVB1 RN7SKP46-201ENST00000515942 234 ntBASIC4.39□□□□□ -1.71
NHLRC1Q6VVB1 AF186190.1-201ENST00000517470 480 ntBASIC4.39□□□□□ -1.71
NHLRC1Q6VVB1 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.39□□□□□ -1.71
NHLRC1Q6VVB1 C1DP5-201ENST00000525775 383 ntBASIC4.39□□□□□ -1.71
NHLRC1Q6VVB1 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NHLRC1Q6VVB1 AC063949.1-201ENST00000552900 865 ntBASIC4.39□□□□□ -1.71
NHLRC1Q6VVB1 AC095057.3-201ENST00000567102 1157 ntBASIC4.39□□□□□ -1.71
NHLRC1Q6VVB1 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.39□□□□□ -1.71
NHLRC1Q6VVB1 EIF1P5-201ENST00000585002 234 ntBASIC4.39□□□□□ -1.71
NHLRC1Q6VVB1 AC015911.5-201ENST00000587076 451 ntBASIC4.39□□□□□ -1.71
NHLRC1Q6VVB1 ADAD1P2-201ENST00000588476 646 ntBASIC4.39□□□□□ -1.71
NHLRC1Q6VVB1 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC4.39□□□□□ -1.71
NHLRC1Q6VVB1 AC087763.1-201ENST00000603391 286 ntBASIC4.39□□□□□ -1.71
NHLRC1Q6VVB1 AC087783.2-201ENST00000605070 562 ntBASIC4.39□□□□□ -1.71
NHLRC1Q6VVB1 AC010424.2-201ENST00000607594 443 ntBASIC4.39□□□□□ -1.71
NHLRC1Q6VVB1 AL353600.1-201ENST00000608148 251 ntBASIC4.39□□□□□ -1.71
NHLRC1Q6VVB1 AC243756.2-201ENST00000618406 463 ntBASIC4.39□□□□□ -1.71
NHLRC1Q6VVB1 AL022401.1-201ENST00000619498 108 ntBASIC4.39□□□□□ -1.71
NHLRC1Q6VVB1 AP000943.4-201ENST00000622912 357 ntBASIC4.39□□□□□ -1.71
NHLRC1Q6VVB1 AP002799.1-201ENST00000623552 423 ntBASIC4.39□□□□□ -1.71
NHLRC1Q6VVB1 AC080188.3-201ENST00000624842 748 ntBASIC4.39□□□□□ -1.71
NHLRC1Q6VVB1 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.39□□□□□ -1.71
NHLRC1Q6VVB1 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
NHLRC1Q6VVB1 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NHLRC1Q6VVB1 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
NHLRC1Q6VVB1 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NHLRC1Q6VVB1 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
NHLRC1Q6VVB1 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
NHLRC1Q6VVB1 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
NHLRC1Q6VVB1 AC017007.4-201ENST00000503353 1352 ntBASIC4.39□□□□□ -1.71
NHLRC1Q6VVB1 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
NHLRC1Q6VVB1 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.38□□□□□ -1.71
NHLRC1Q6VVB1 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
NHLRC1Q6VVB1 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
NHLRC1Q6VVB1 DHX9P1-201ENST00000436565 3076 ntBASIC4.38□□□□□ -1.71
NHLRC1Q6VVB1 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
NHLRC1Q6VVB1 AP001273.1-201ENST00000624493 3152 ntBASIC4.38□□□□□ -1.71
NHLRC1Q6VVB1 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
NHLRC1Q6VVB1 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
NHLRC1Q6VVB1 RN7SKP104-201ENST00000362605 328 ntBASIC4.38□□□□□ -1.71
NHLRC1Q6VVB1 RN7SKP95-201ENST00000362860 303 ntBASIC4.38□□□□□ -1.71
NHLRC1Q6VVB1 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
NHLRC1Q6VVB1 RN7SKP199-201ENST00000410325 305 ntBASIC4.38□□□□□ -1.71
NHLRC1Q6VVB1 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC4.38□□□□□ -1.71
NHLRC1Q6VVB1 RPL23AP27-201ENST00000415161 451 ntBASIC4.38□□□□□ -1.71
NHLRC1Q6VVB1 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NHLRC1Q6VVB1 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NHLRC1Q6VVB1 RPL30P3-201ENST00000424262 333 ntBASIC4.38□□□□□ -1.71
NHLRC1Q6VVB1 AL138785.1-201ENST00000425821 331 ntBASIC4.38□□□□□ -1.71
NHLRC1Q6VVB1 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NHLRC1Q6VVB1 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC4.38□□□□□ -1.71
NHLRC1Q6VVB1 AL512661.1-201ENST00000434586 1253 ntBASIC4.38□□□□□ -1.71
NHLRC1Q6VVB1 AC002542.1-201ENST00000440683 193 ntBASIC4.38□□□□□ -1.71
NHLRC1Q6VVB1 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NHLRC1Q6VVB1 GEMIN8P3-201ENST00000445417 720 ntBASIC4.38□□□□□ -1.71
NHLRC1Q6VVB1 RPL32P14-201ENST00000463196 378 ntBASIC4.38□□□□□ -1.71
NHLRC1Q6VVB1 CYCSP20-201ENST00000473154 315 ntBASIC4.38□□□□□ -1.71
NHLRC1Q6VVB1 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.38□□□□□ -1.71
NHLRC1Q6VVB1 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.38□□□□□ -1.71
NHLRC1Q6VVB1 RPS23P1-201ENST00000491662 432 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms