Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 AC233702.7-202ENST00000582941 211 ntBASIC6.48□□□□□ -1.37
RNF43Q68DV7 AC013244.1-201ENST00000604279 193 ntBASIC6.48□□□□□ -1.37
RNF43Q68DV7 AL591167.1-201ENST00000607321 456 ntBASIC6.48□□□□□ -1.37
RNF43Q68DV7 AC005962.2-201ENST00000611427 652 ntBASIC6.48□□□□□ -1.37
RNF43Q68DV7 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC6.48□□□□□ -1.37
RNF43Q68DV7 AC129778.1-202ENST00000623812 261 ntBASIC6.48□□□□□ -1.37
RNF43Q68DV7 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC6.48□□□□□ -1.37
RNF43Q68DV7 AL591379.1-207ENST00000635982 261 ntBASIC6.48□□□□□ -1.37
RNF43Q68DV7 AMYH02020865.1-205ENST00000636189 261 ntBASIC6.48□□□□□ -1.37
RNF43Q68DV7 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
RNF43Q68DV7 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.48□□□□□ -1.37
RNF43Q68DV7 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
RNF43Q68DV7 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
RNF43Q68DV7 AC106872.5-201ENST00000508856 1416 ntBASIC6.48□□□□□ -1.37
RNF43Q68DV7 AL034370.1-201ENST00000397254 1590 ntBASIC6.48□□□□□ -1.37
RNF43Q68DV7 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC6.48□□□□□ -1.37
RNF43Q68DV7 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.48□□□□□ -1.37
RNF43Q68DV7 AC132825.1-201ENST00000463573 2247 ntBASIC6.48□□□□□ -1.37
RNF43Q68DV7 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
RNF43Q68DV7 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.47□□□□□ -1.37
RNF43Q68DV7 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
RNF43Q68DV7 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
RNF43Q68DV7 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
RNF43Q68DV7 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
RNF43Q68DV7 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
RNF43Q68DV7 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC6.47□□□□□ -1.37
RNF43Q68DV7 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.47□□□□□ -1.37
RNF43Q68DV7 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
RNF43Q68DV7 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
RNF43Q68DV7 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.47□□□□□ -1.37
RNF43Q68DV7 NAP1L4P1-201ENST00000319092 1157 ntBASIC6.47□□□□□ -1.37
RNF43Q68DV7 RNA5SP110-201ENST00000362638 115 ntBASIC6.47□□□□□ -1.37
RNF43Q68DV7 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.47□□□□□ -1.37
RNF43Q68DV7 RNU11-201ENST00000387069 134 ntBASIC6.47□□□□□ -1.37
RNF43Q68DV7 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
RNF43Q68DV7 RNU6-907P-201ENST00000390924 102 ntBASIC6.47□□□□□ -1.37
RNF43Q68DV7 AL121977.1-201ENST00000401636 979 ntBASIC6.47□□□□□ -1.37
RNF43Q68DV7 MTCYBP36-201ENST00000404146 440 ntBASIC6.47□□□□□ -1.37
RNF43Q68DV7 AL121835.1-201ENST00000404250 354 ntBASIC6.47□□□□□ -1.37
RNF43Q68DV7 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC6.47□□□□□ -1.37
RNF43Q68DV7 RPL17P12-201ENST00000413391 526 ntBASIC6.47□□□□□ -1.37
RNF43Q68DV7 AC092647.1-201ENST00000420654 287 ntBASIC6.47□□□□□ -1.37
RNF43Q68DV7 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC6.47□□□□□ -1.37
RNF43Q68DV7 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
RNF43Q68DV7 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC6.47□□□□□ -1.37
RNF43Q68DV7 RPS25P9-201ENST00000435591 252 ntBASIC6.47□□□□□ -1.37
RNF43Q68DV7 AL645936.1-201ENST00000441979 518 ntBASIC6.47□□□□□ -1.37
RNF43Q68DV7 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC6.47□□□□□ -1.37
RNF43Q68DV7 AL022237.1-201ENST00000446663 358 ntBASIC6.47□□□□□ -1.37
RNF43Q68DV7 MORF4-201ENST00000447135 971 ntBASIC6.47□□□□□ -1.37
RNF43Q68DV7 EIF4A1P6-201ENST00000448133 1210 ntBASIC6.47□□□□□ -1.37
RNF43Q68DV7 HLA-DPA3-207ENST00000454398 229 ntBASIC6.47□□□□□ -1.37
RNF43Q68DV7 AC103563.5-201ENST00000455643 364 ntBASIC6.47□□□□□ -1.37
RNF43Q68DV7 EIF4A2P4-201ENST00000458691 1196 ntBASIC6.47□□□□□ -1.37
RNF43Q68DV7 RNU7-157P-201ENST00000459600 66 ntBASIC6.47□□□□□ -1.37
RNF43Q68DV7 PPP1R11P1-201ENST00000486095 376 ntBASIC6.47□□□□□ -1.37
RNF43Q68DV7 RNA5SP434-201ENST00000516647 121 ntBASIC6.47□□□□□ -1.37
RNF43Q68DV7 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.47□□□□□ -1.37
RNF43Q68DV7 IGKV3D-25-201ENST00000519599 235 ntBASIC6.47□□□□□ -1.37
RNF43Q68DV7 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC6.47□□□□□ -1.37
RNF43Q68DV7 IGHVIII-67-4-201ENST00000524281 296 ntBASIC6.47□□□□□ -1.37
RNF43Q68DV7 AP001858.2-201ENST00000536213 601 ntBASIC6.47□□□□□ -1.37
RNF43Q68DV7 AC090022.1-201ENST00000546569 311 ntBASIC6.47□□□□□ -1.37
RNF43Q68DV7 AC093027.1-201ENST00000546698 429 ntBASIC6.47□□□□□ -1.37
RNF43Q68DV7 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.47□□□□□ -1.37
RNF43Q68DV7 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC6.47□□□□□ -1.37
RNF43Q68DV7 HMGB1P33-201ENST00000563485 527 ntBASIC6.47□□□□□ -1.37
RNF43Q68DV7 OR4H6P-201ENST00000563771 921 ntBASIC6.47□□□□□ -1.37
RNF43Q68DV7 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.47□□□□□ -1.37
RNF43Q68DV7 AL360012.1-201ENST00000602813 131 ntBASIC6.47□□□□□ -1.37
RNF43Q68DV7 AC073091.2-201ENST00000603205 907 ntBASIC6.47□□□□□ -1.37
RNF43Q68DV7 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC6.47□□□□□ -1.37
RNF43Q68DV7 RNU6ATAC35P-201ENST00000609276 444 ntBASIC6.47□□□□□ -1.37
RNF43Q68DV7 AC092266.1-201ENST00000610958 165 ntBASIC6.47□□□□□ -1.37
RNF43Q68DV7 MIR6826-201ENST00000617808 98 ntBASIC6.47□□□□□ -1.37
RNF43Q68DV7 MIR7159-201ENST00000620587 66 ntBASIC6.47□□□□□ -1.37
RNF43Q68DV7 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC6.47□□□□□ -1.37
RNF43Q68DV7 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.47□□□□□ -1.37
RNF43Q68DV7 AL161901.1-201ENST00000624954 3425 ntBASIC6.47□□□□□ -1.37
RNF43Q68DV7 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.47□□□□□ -1.37
RNF43Q68DV7 AL355834.1-201ENST00000556602 3965 ntBASIC6.47□□□□□ -1.37
RNF43Q68DV7 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
RNF43Q68DV7 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.47□□□□□ -1.37
RNF43Q68DV7 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
RNF43Q68DV7 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC6.47□□□□□ -1.37
RNF43Q68DV7 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.47□□□□□ -1.37
RNF43Q68DV7 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
RNF43Q68DV7 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
RNF43Q68DV7 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.46□□□□□ -1.37
RNF43Q68DV7 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
RNF43Q68DV7 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
RNF43Q68DV7 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.46□□□□□ -1.38
RNF43Q68DV7 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
RNF43Q68DV7 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
RNF43Q68DV7 SYF2-202ENST00000354361 926 ntTSL 2 BASIC6.46□□□□□ -1.38
RNF43Q68DV7 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.46□□□□□ -1.38
RNF43Q68DV7 Y_RNA.296-201ENST00000364930 108 ntBASIC6.46□□□□□ -1.38
RNF43Q68DV7 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
RNF43Q68DV7 Y_RNA.419-201ENST00000384041 102 ntBASIC6.46□□□□□ -1.38
RNF43Q68DV7 SNORA40.3-201ENST00000390964 122 ntBASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms