Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AC051619.2-201ENST00000559063 397 ntBASIC5.47□□□□□ -1.53
NEK3P51956 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC5.47□□□□□ -1.53
NEK3P51956 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.47□□□□□ -1.53
NEK3P51956 AC016180.1-201ENST00000567945 403 ntBASIC5.47□□□□□ -1.53
NEK3P51956 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.47□□□□□ -1.53
NEK3P51956 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.47□□□□□ -1.53
NEK3P51956 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC5.47□□□□□ -1.53
NEK3P51956 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.47□□□□□ -1.53
NEK3P51956 AP000769.2-201ENST00000602344 396 ntBASIC5.47□□□□□ -1.53
NEK3P51956 AL445435.1-201ENST00000604232 665 ntBASIC5.47□□□□□ -1.53
NEK3P51956 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC5.47□□□□□ -1.53
NEK3P51956 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.47□□□□□ -1.53
NEK3P51956 AC073869.8-201ENST00000641806 335 ntBASIC5.47□□□□□ -1.53
NEK3P51956 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.47□□□□□ -1.53
NEK3P51956 AC004817.4-201ENST00000602396 3625 ntBASIC5.47□□□□□ -1.53
NEK3P51956 AC006210.2-201ENST00000367074 1545 ntBASIC5.47□□□□□ -1.53
NEK3P51956 PANDAR-201ENST00000629595 1506 ntBASIC5.47□□□□□ -1.53
NEK3P51956 AC005005.4-201ENST00000623789 16698 ntBASIC5.47□□□□□ -1.53
NEK3P51956 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.47□□□□□ -1.53
NEK3P51956 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
NEK3P51956 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
NEK3P51956 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
NEK3P51956 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
NEK3P51956 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
NEK3P51956 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.46□□□□□ -1.53
NEK3P51956 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
NEK3P51956 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
NEK3P51956 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
NEK3P51956 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
NEK3P51956 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
NEK3P51956 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
NEK3P51956 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
NEK3P51956 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
NEK3P51956 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.46□□□□□ -1.54
NEK3P51956 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
NEK3P51956 AC007618.1-201ENST00000366455 732 ntBASIC5.46□□□□□ -1.54
NEK3P51956 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
NEK3P51956 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
NEK3P51956 RNU4-34P-201ENST00000410431 124 ntBASIC5.46□□□□□ -1.54
NEK3P51956 RNU4-22P-201ENST00000411058 166 ntBASIC5.46□□□□□ -1.54
NEK3P51956 PRELID3BP11-201ENST00000414230 479 ntBASIC5.46□□□□□ -1.54
NEK3P51956 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.46□□□□□ -1.54
NEK3P51956 OR4K6P-201ENST00000416478 897 ntBASIC5.46□□□□□ -1.54
NEK3P51956 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC5.46□□□□□ -1.54
NEK3P51956 OFD1P2Y-201ENST00000421895 1149 ntBASIC5.46□□□□□ -1.54
NEK3P51956 DNAJA1P1-201ENST00000425106 1187 ntBASIC5.46□□□□□ -1.54
NEK3P51956 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.46□□□□□ -1.54
NEK3P51956 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.46□□□□□ -1.54
NEK3P51956 AC084290.1-201ENST00000434995 374 ntBASIC5.46□□□□□ -1.54
NEK3P51956 GTF2IP7-202ENST00000436677 309 ntBASIC5.46□□□□□ -1.54
NEK3P51956 PPIAP17-201ENST00000438507 471 ntBASIC5.46□□□□□ -1.54
NEK3P51956 EEF1A1P39-201ENST00000440791 250 ntBASIC5.46□□□□□ -1.54
NEK3P51956 CNOT7P2-201ENST00000441051 832 ntBASIC5.46□□□□□ -1.54
NEK3P51956 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC5.46□□□□□ -1.54
NEK3P51956 PTMAP3-201ENST00000447474 330 ntBASIC5.46□□□□□ -1.54
NEK3P51956 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC5.46□□□□□ -1.54
NEK3P51956 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
NEK3P51956 COX6B1P2-201ENST00000489624 230 ntBASIC5.46□□□□□ -1.54
NEK3P51956 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
NEK3P51956 AL049874.2-201ENST00000492636 288 ntBASIC5.46□□□□□ -1.54
NEK3P51956 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC5.46□□□□□ -1.54
NEK3P51956 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC5.46□□□□□ -1.54
NEK3P51956 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC5.46□□□□□ -1.54
NEK3P51956 AC048346.1-201ENST00000510247 144 ntBASIC5.46□□□□□ -1.54
NEK3P51956 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.46□□□□□ -1.54
NEK3P51956 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.46□□□□□ -1.54
NEK3P51956 SOD1P3-201ENST00000518682 454 ntBASIC5.46□□□□□ -1.54
NEK3P51956 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC5.46□□□□□ -1.54
NEK3P51956 AC022790.1-201ENST00000522872 204 ntBASIC5.46□□□□□ -1.54
NEK3P51956 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC5.46□□□□□ -1.54
NEK3P51956 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.46□□□□□ -1.54
NEK3P51956 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
NEK3P51956 AC092747.2-201ENST00000545069 983 ntBASIC5.46□□□□□ -1.54
NEK3P51956 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
NEK3P51956 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.46□□□□□ -1.54
NEK3P51956 AC005341.1-201ENST00000571086 708 ntBASIC5.46□□□□□ -1.54
NEK3P51956 MIR3912-201ENST00000577566 105 ntBASIC5.46□□□□□ -1.54
NEK3P51956 AC022069.1-201ENST00000582910 658 ntBASIC5.46□□□□□ -1.54
NEK3P51956 CCDC58P3-201ENST00000590792 430 ntBASIC5.46□□□□□ -1.54
NEK3P51956 AL020997.3-201ENST00000602843 359 ntBASIC5.46□□□□□ -1.54
NEK3P51956 MIR6864-201ENST00000617935 70 ntBASIC5.46□□□□□ -1.54
NEK3P51956 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.46□□□□□ -1.54
NEK3P51956 AL034549.2-201ENST00000618285 3373 ntBASIC5.46□□□□□ -1.54
NEK3P51956 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
NEK3P51956 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
NEK3P51956 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
NEK3P51956 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.46□□□□□ -1.54
NEK3P51956 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.46□□□□□ -1.54
NEK3P51956 SUCLA2P2-201ENST00000417269 1309 ntBASIC5.46□□□□□ -1.54
NEK3P51956 AL355578.1-201ENST00000607405 1328 ntBASIC5.46□□□□□ -1.54
NEK3P51956 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
NEK3P51956 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
NEK3P51956 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
NEK3P51956 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
NEK3P51956 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.45□□□□□ -1.54
NEK3P51956 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
NEK3P51956 C4BPAP1-201ENST00000415474 1893 ntBASIC5.45□□□□□ -1.54
NEK3P51956 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
NEK3P51956 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
NEK3P51956 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms