Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CLIP1P30622 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CLIP1P30622 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CLIP1P30622 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CLIP1P30622 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
CLIP1P30622 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
CLIP1P30622 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC6.57□□□□□ -1.36
CLIP1P30622 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
CLIP1P30622 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC6.57□□□□□ -1.36
CLIP1P30622 CASC19-261ENST00000641853 1638 ntBASIC6.57□□□□□ -1.36
CLIP1P30622 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CLIP1P30622 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CLIP1P30622 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CLIP1P30622 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CLIP1P30622 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CLIP1P30622 RN7SKP159-201ENST00000410657 292 ntBASIC6.57□□□□□ -1.36
CLIP1P30622 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC6.57□□□□□ -1.36
CLIP1P30622 OR8F1P-201ENST00000425243 930 ntBASIC6.57□□□□□ -1.36
CLIP1P30622 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC6.57□□□□□ -1.36
CLIP1P30622 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC6.57□□□□□ -1.36
CLIP1P30622 RPS4XP4-201ENST00000443195 763 ntBASIC6.57□□□□□ -1.36
CLIP1P30622 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC6.57□□□□□ -1.36
CLIP1P30622 VN1R34P-201ENST00000447387 883 ntBASIC6.57□□□□□ -1.36
CLIP1P30622 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
CLIP1P30622 AC010460.1-201ENST00000507087 466 ntBASIC6.57□□□□□ -1.36
CLIP1P30622 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC6.57□□□□□ -1.36
CLIP1P30622 AC063950.1-201ENST00000552036 308 ntBASIC6.57□□□□□ -1.36
CLIP1P30622 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC6.57□□□□□ -1.36
CLIP1P30622 AC005261.2-201ENST00000593427 4258 ntBASIC6.56□□□□□ -1.36
CLIP1P30622 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
CLIP1P30622 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CLIP1P30622 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC6.56□□□□□ -1.36
CLIP1P30622 GHR-202ENST00000357703 4316 ntTSL 5 BASIC6.56□□□□□ -1.36
CLIP1P30622 GHR-213ENST00000622294 4312 ntTSL 5 BASIC6.56□□□□□ -1.36
CLIP1P30622 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC6.56□□□□□ -1.36
CLIP1P30622 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC6.56□□□□□ -1.36
CLIP1P30622 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC6.56□□□□□ -1.36
CLIP1P30622 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC6.56□□□□□ -1.36
CLIP1P30622 RPL38P1-201ENST00000460914 211 ntBASIC6.56□□□□□ -1.36
CLIP1P30622 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC6.56□□□□□ -1.36
CLIP1P30622 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC6.56□□□□□ -1.36
CLIP1P30622 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC6.56□□□□□ -1.36
CLIP1P30622 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC6.56□□□□□ -1.36
CLIP1P30622 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC6.56□□□□□ -1.36
CLIP1P30622 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC6.56□□□□□ -1.36
CLIP1P30622 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CLIP1P30622 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CLIP1P30622 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC6.55□□□□□ -1.36
CLIP1P30622 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CLIP1P30622 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CLIP1P30622 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CLIP1P30622 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
CLIP1P30622 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC6.55□□□□□ -1.36
CLIP1P30622 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
CLIP1P30622 AP001273.1-201ENST00000624493 3152 ntBASIC6.55□□□□□ -1.36
CLIP1P30622 MIR670-201ENST00000390142 98 ntBASIC6.55□□□□□ -1.36
CLIP1P30622 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC6.55□□□□□ -1.36
CLIP1P30622 AL358472.1-201ENST00000431295 329 ntBASIC6.55□□□□□ -1.36
CLIP1P30622 AC007389.2-201ENST00000434630 306 ntBASIC6.55□□□□□ -1.36
CLIP1P30622 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC6.55□□□□□ -1.36
CLIP1P30622 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CLIP1P30622 RPL7P1-201ENST00000468161 747 ntBASIC6.55□□□□□ -1.36
CLIP1P30622 RPL7P9-201ENST00000468715 747 ntBASIC6.55□□□□□ -1.36
CLIP1P30622 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CLIP1P30622 IFITM8P-201ENST00000522529 394 ntBASIC6.55□□□□□ -1.36
CLIP1P30622 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC6.55□□□□□ -1.36
CLIP1P30622 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
CLIP1P30622 OR51C1P-201ENST00000608504 942 ntBASIC6.55□□□□□ -1.36
CLIP1P30622 SMCR2_2.1-201ENST00000619783 161 ntBASIC6.55□□□□□ -1.36
CLIP1P30622 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC6.55□□□□□ -1.36
CLIP1P30622 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CLIP1P30622 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CLIP1P30622 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
CLIP1P30622 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CLIP1P30622 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
CLIP1P30622 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CLIP1P30622 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CLIP1P30622 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC6.55□□□□□ -1.36
CLIP1P30622 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
CLIP1P30622 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
CLIP1P30622 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CLIP1P30622 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
CLIP1P30622 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CLIP1P30622 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
CLIP1P30622 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC6.54□□□□□ -1.36
CLIP1P30622 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CLIP1P30622 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CLIP1P30622 RNU1-15P-201ENST00000353977 144 ntBASIC6.54□□□□□ -1.36
CLIP1P30622 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
CLIP1P30622 RNU4-6P-201ENST00000410804 122 ntBASIC6.54□□□□□ -1.36
CLIP1P30622 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC6.54□□□□□ -1.36
CLIP1P30622 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC6.54□□□□□ -1.36
CLIP1P30622 AL691449.1-201ENST00000426570 421 ntBASIC6.54□□□□□ -1.36
CLIP1P30622 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC6.54□□□□□ -1.36
CLIP1P30622 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC6.54□□□□□ -1.36
CLIP1P30622 PSMC1P13-201ENST00000458195 985 ntBASIC6.54□□□□□ -1.36
CLIP1P30622 snoU13.22-201ENST00000459428 104 ntBASIC6.54□□□□□ -1.36
CLIP1P30622 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC6.54□□□□□ -1.36
CLIP1P30622 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC6.54□□□□□ -1.36
CLIP1P30622 AC021146.3-201ENST00000511911 260 ntBASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms