Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 C2orf83-204ENST00000641422 291 ntAPPRIS ALT2 BASIC8.56□□□□□ -1.04
CD44P16070 ZNF385B-202ENST00000409343 2750 ntTSL 2 BASIC8.56□□□□□ -1.04
CD44P16070 FCGR3A-201ENST00000367967 2086 ntAPPRIS P1 TSL 3 BASIC8.56□□□□□ -1.04
CD44P16070 ATF2-203ENST00000392544 1919 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
CD44P16070 SLC39A12-204ENST00000539911 2461 ntTSL 2 BASIC8.56□□□□□ -1.04
CD44P16070 MRE11P1-201ENST00000464884 2127 ntBASIC8.56□□□□□ -1.04
CD44P16070 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CD44P16070 SORBS1-210ENST00000371246 6931 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
CD44P16070 NUP107-201ENST00000229179 6457 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CD44P16070 DOCK2-211ENST00000520908 4654 ntTSL 2 BASIC8.56□□□□□ -1.04
CD44P16070 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
CD44P16070 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC8.55□□□□□ -1.04
CD44P16070 RAD54B-202ENST00000336148 3068 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
CD44P16070 CYFIP2-221ENST00000618329 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
CD44P16070 ACSL5-201ENST00000354273 3353 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
CD44P16070 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
CD44P16070 ZNF736-202ENST00000423484 7119 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
CD44P16070 KRIT1-203ENST00000394505 3143 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
CD44P16070 EIF4E2-207ENST00000409514 3525 ntTSL 5 BASIC8.55□□□□□ -1.04
CD44P16070 NSD2-208ENST00000420906 5109 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
CD44P16070 MIR628-201ENST00000385229 95 ntBASIC8.55□□□□□ -1.04
CD44P16070 IGLV3-32-201ENST00000390303 383 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
CD44P16070 TRBV6-1-201ENST00000390353 401 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
CD44P16070 TRBV7-4-201ENST00000390369 347 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
CD44P16070 TRBV7-7-201ENST00000390377 347 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
CD44P16070 RN7SKP205-201ENST00000410999 307 ntBASIC8.55□□□□□ -1.04
CD44P16070 RPLP0P7-201ENST00000416050 667 ntBASIC8.55□□□□□ -1.04
CD44P16070 FAM96B-201ENST00000422424 676 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
CD44P16070 AC092802.3-201ENST00000434207 420 ntTSL 3 BASIC8.55□□□□□ -1.04
CD44P16070 C5orf24-203ENST00000435259 851 ntAPPRIS P1 TSL 3 BASIC8.55□□□□□ -1.04
CD44P16070 AQP4-203ENST00000440832 1169 ntTSL 5 BASIC8.55□□□□□ -1.04
CD44P16070 AC114495.1-201ENST00000441274 436 ntBASIC8.55□□□□□ -1.04
CD44P16070 AL035090.1-201ENST00000454835 332 ntBASIC8.55□□□□□ -1.04
CD44P16070 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
CD44P16070 PPIAP28-201ENST00000458378 485 ntBASIC8.55□□□□□ -1.04
CD44P16070 GGTA1P-204ENST00000488429 1104 ntBASIC8.55□□□□□ -1.04
CD44P16070 RNU6-911P-201ENST00000516523 104 ntBASIC8.55□□□□□ -1.04
CD44P16070 SLN-202ENST00000525934 436 ntAPPRIS P1 TSL 3 BASIC8.55□□□□□ -1.04
CD44P16070 ZNF503-AS1-205ENST00000530606 549 ntTSL 4 BASIC8.55□□□□□ -1.04
CD44P16070 SOX5-213ENST00000541847 758 ntTSL 3 BASIC8.55□□□□□ -1.04
CD44P16070 KDM1B-203ENST00000546309 496 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
CD44P16070 OR4N1P-201ENST00000554847 949 ntBASIC8.55□□□□□ -1.04
CD44P16070 RPLP1-205ENST00000560274 256 ntTSL 3 BASIC8.55□□□□□ -1.04
CD44P16070 AC034105.2-201ENST00000561866 238 ntBASIC8.55□□□□□ -1.04
CD44P16070 AP003115.1-201ENST00000569849 463 ntBASIC8.55□□□□□ -1.04
CD44P16070 MIR4300-201ENST00000581016 96 ntBASIC8.55□□□□□ -1.04
CD44P16070 OR7A18P-201ENST00000600416 277 ntBASIC8.55□□□□□ -1.04
CD44P16070 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC8.55□□□□□ -1.04
CD44P16070 AC012488.1-201ENST00000611221 640 ntBASIC8.55□□□□□ -1.04
CD44P16070 AL109933.4-201ENST00000612111 157 ntBASIC8.55□□□□□ -1.04
CD44P16070 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC8.55□□□□□ -1.04
CD44P16070 AP000356.4-201ENST00000639500 172 ntBASIC8.55□□□□□ -1.04
CD44P16070 CCDC66-203ENST00000394672 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
CD44P16070 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC8.55□□□□□ -1.04
CD44P16070 SLC7A2-202ENST00000398090 7557 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
CD44P16070 CRYBG3-201ENST00000389622 10729 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
CD44P16070 NEXN-202ENST00000334785 2607 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
CD44P16070 CEACAM6-201ENST00000199764 2700 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
CD44P16070 MAPK10-298ENST00000641297 3040 ntAPPRIS P2 BASIC8.55□□□□□ -1.04
CD44P16070 LINC00269-201ENST00000399711 2173 ntTSL 2 BASIC8.55□□□□□ -1.04
CD44P16070 FAR2-202ENST00000536681 3616 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
CD44P16070 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
CD44P16070 TMED8-201ENST00000216468 7784 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
CD44P16070 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC8.55□□□□□ -1.04
CD44P16070 LOXHD1-201ENST00000300591 3970 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
CD44P16070 NFRKB-203ENST00000524794 4351 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
CD44P16070 AC022507.1-201ENST00000548349 1505 ntBASIC8.54□□□□□ -1.04
CD44P16070 LMO7-207ENST00000465261 5580 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
CD44P16070 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
CD44P16070 ENSA-204ENST00000356527 2546 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
CD44P16070 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
CD44P16070 RHOJ-201ENST00000316754 3302 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
CD44P16070 TCAM1P-205ENST00000478379 3317 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
CD44P16070 TRIM59-208ENST00000543469 4615 ntTSL 5 BASIC8.54□□□□□ -1.04
CD44P16070 OR7E25P-202ENST00000641088 5937 ntBASIC8.54□□□□□ -1.04
CD44P16070 CLASP1-202ENST00000397587 7915 ntTSL 5 BASIC8.54□□□□□ -1.04
CD44P16070 ZBTB18-201ENST00000358704 3851 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
CD44P16070 ARPP21-207ENST00000417925 3086 ntTSL 2 BASIC8.54□□□□□ -1.04
CD44P16070 ZNF85-202ENST00000328178 2296 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
CD44P16070 ETV1-210ENST00000430479 6740 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
CD44P16070 CDY1-202ENST00000361963 2177 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
CD44P16070 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC8.54□□□□□ -1.04
CD44P16070 CCT8P1-201ENST00000413611 1657 ntBASIC8.54□□□□□ -1.04
CD44P16070 CCR3-202ENST00000395940 1581 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
CD44P16070 NAV2-216ENST00000540292 11003 ntAPPRIS ALT1 TSL 5 BASIC8.54□□□□□ -1.04
CD44P16070 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
CD44P16070 RNU6-834P-201ENST00000362367 110 ntBASIC8.54□□□□□ -1.04
CD44P16070 Y_RNA.292-201ENST00000364904 97 ntBASIC8.54□□□□□ -1.04
CD44P16070 SNORA10B-201ENST00000384458 133 ntBASIC8.54□□□□□ -1.04
CD44P16070 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC8.54□□□□□ -1.04
CD44P16070 RBMY2FP-202ENST00000420346 1263 ntBASIC8.54□□□□□ -1.04
CD44P16070 NMD3P2-201ENST00000421815 761 ntBASIC8.54□□□□□ -1.04
CD44P16070 AL050402.1-201ENST00000440477 770 ntTSL 3 BASIC8.54□□□□□ -1.04
CD44P16070 AC084809.2-201ENST00000444464 512 ntTSL 2 BASIC8.54□□□□□ -1.04
CD44P16070 GAS5-218ENST00000448718 565 ntTSL 2 BASIC8.54□□□□□ -1.04
CD44P16070 AC079168.2-201ENST00000453977 416 ntBASIC8.54□□□□□ -1.04
CD44P16070 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC8.54□□□□□ -1.04
CD44P16070 AC087884.1-201ENST00000469738 328 ntBASIC8.54□□□□□ -1.04
CD44P16070 RN7SL809P-201ENST00000482040 297 ntBASIC8.54□□□□□ -1.04
CD44P16070 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC8.54□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 134.4 ms