Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
DNMT3AQ9Y6K1 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
DNMT3AQ9Y6K1 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
DNMT3AQ9Y6K1 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
DNMT3AQ9Y6K1 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
DNMT3AQ9Y6K1 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
DNMT3AQ9Y6K1 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DNMT3AQ9Y6K1 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DNMT3AQ9Y6K1 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.05■□□□□ 0.64
DNMT3AQ9Y6K1 AC004980.1-204ENST00000429707 299 ntBASIC19.05■□□□□ 0.64
DNMT3AQ9Y6K1 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
DNMT3AQ9Y6K1 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
DNMT3AQ9Y6K1 NUDT16P1-203ENST00000513809 620 ntBASIC19.05■□□□□ 0.64
DNMT3AQ9Y6K1 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.05■□□□□ 0.64
DNMT3AQ9Y6K1 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.05■□□□□ 0.64
DNMT3AQ9Y6K1 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.05■□□□□ 0.64
DNMT3AQ9Y6K1 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
DNMT3AQ9Y6K1 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.05■□□□□ 0.64
DNMT3AQ9Y6K1 AC026471.5-201ENST00000615068 467 ntBASIC19.05■□□□□ 0.64
DNMT3AQ9Y6K1 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DNMT3AQ9Y6K1 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
DNMT3AQ9Y6K1 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DNMT3AQ9Y6K1 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
DNMT3AQ9Y6K1 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DNMT3AQ9Y6K1 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DNMT3AQ9Y6K1 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.05■□□□□ 0.64
DNMT3AQ9Y6K1 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DNMT3AQ9Y6K1 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DNMT3AQ9Y6K1 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DNMT3AQ9Y6K1 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DNMT3AQ9Y6K1 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
DNMT3AQ9Y6K1 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.05■□□□□ 0.64
DNMT3AQ9Y6K1 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
DNMT3AQ9Y6K1 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
DNMT3AQ9Y6K1 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
DNMT3AQ9Y6K1 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
DNMT3AQ9Y6K1 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
DNMT3AQ9Y6K1 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
DNMT3AQ9Y6K1 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.04■□□□□ 0.64
DNMT3AQ9Y6K1 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
DNMT3AQ9Y6K1 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.04■□□□□ 0.64
DNMT3AQ9Y6K1 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.04■□□□□ 0.64
DNMT3AQ9Y6K1 AC116562.2-201ENST00000507042 360 ntBASIC19.04■□□□□ 0.64
DNMT3AQ9Y6K1 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.04■□□□□ 0.64
DNMT3AQ9Y6K1 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.04■□□□□ 0.64
DNMT3AQ9Y6K1 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
DNMT3AQ9Y6K1 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
DNMT3AQ9Y6K1 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
DNMT3AQ9Y6K1 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.04■□□□□ 0.64
DNMT3AQ9Y6K1 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.04■□□□□ 0.64
DNMT3AQ9Y6K1 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
DNMT3AQ9Y6K1 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
DNMT3AQ9Y6K1 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
DNMT3AQ9Y6K1 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
DNMT3AQ9Y6K1 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
DNMT3AQ9Y6K1 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
DNMT3AQ9Y6K1 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
DNMT3AQ9Y6K1 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
DNMT3AQ9Y6K1 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
DNMT3AQ9Y6K1 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.03■□□□□ 0.64
DNMT3AQ9Y6K1 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
DNMT3AQ9Y6K1 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.03■□□□□ 0.64
DNMT3AQ9Y6K1 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
DNMT3AQ9Y6K1 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
DNMT3AQ9Y6K1 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
DNMT3AQ9Y6K1 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.03■□□□□ 0.64
DNMT3AQ9Y6K1 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
DNMT3AQ9Y6K1 TSPY7P-201ENST00000431358 1114 ntBASIC19.03■□□□□ 0.64
DNMT3AQ9Y6K1 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
DNMT3AQ9Y6K1 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.03■□□□□ 0.64
DNMT3AQ9Y6K1 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
DNMT3AQ9Y6K1 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.03■□□□□ 0.64
DNMT3AQ9Y6K1 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
DNMT3AQ9Y6K1 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.03■□□□□ 0.64
DNMT3AQ9Y6K1 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
DNMT3AQ9Y6K1 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.03■□□□□ 0.64
DNMT3AQ9Y6K1 FSCN1P1-201ENST00000568912 1481 ntBASIC19.03■□□□□ 0.64
DNMT3AQ9Y6K1 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
DNMT3AQ9Y6K1 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
DNMT3AQ9Y6K1 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
DNMT3AQ9Y6K1 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
DNMT3AQ9Y6K1 TREX1-205ENST00000625293 1783 ntBASIC19.02■□□□□ 0.64
DNMT3AQ9Y6K1 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.02■□□□□ 0.64
DNMT3AQ9Y6K1 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
DNMT3AQ9Y6K1 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.02■□□□□ 0.64
DNMT3AQ9Y6K1 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.02■□□□□ 0.64
DNMT3AQ9Y6K1 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.02■□□□□ 0.64
DNMT3AQ9Y6K1 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.02■□□□□ 0.64
DNMT3AQ9Y6K1 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.02■□□□□ 0.64
DNMT3AQ9Y6K1 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.02■□□□□ 0.64
DNMT3AQ9Y6K1 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.02■□□□□ 0.64
DNMT3AQ9Y6K1 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.02■□□□□ 0.64
DNMT3AQ9Y6K1 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
DNMT3AQ9Y6K1 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
DNMT3AQ9Y6K1 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
DNMT3AQ9Y6K1 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
DNMT3AQ9Y6K1 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.63
DNMT3AQ9Y6K1 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.01■□□□□ 0.63
DNMT3AQ9Y6K1 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
DNMT3AQ9Y6K1 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms