Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.81■□□□□ 0.92
SNX9Q9Y5X1 AL031985.4-201ENST00000642138 673 ntBASIC20.81■□□□□ 0.92
SNX9Q9Y5X1 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SNX9Q9Y5X1 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SNX9Q9Y5X1 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SNX9Q9Y5X1 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.81■□□□□ 0.92
SNX9Q9Y5X1 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SNX9Q9Y5X1 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.81■□□□□ 0.92
SNX9Q9Y5X1 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SNX9Q9Y5X1 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.81■□□□□ 0.92
SNX9Q9Y5X1 AIRN-201ENST00000601203 4374 ntBASIC20.81■□□□□ 0.92
SNX9Q9Y5X1 AFG3L1P-217ENST00000557444 2447 ntBASIC20.8■□□□□ 0.92
SNX9Q9Y5X1 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
SNX9Q9Y5X1 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
SNX9Q9Y5X1 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SNX9Q9Y5X1 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
SNX9Q9Y5X1 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SNX9Q9Y5X1 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.8■□□□□ 0.92
SNX9Q9Y5X1 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SNX9Q9Y5X1 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
SNX9Q9Y5X1 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.8■□□□□ 0.92
SNX9Q9Y5X1 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.8■□□□□ 0.92
SNX9Q9Y5X1 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SNX9Q9Y5X1 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.8■□□□□ 0.92
SNX9Q9Y5X1 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.8■□□□□ 0.92
SNX9Q9Y5X1 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SNX9Q9Y5X1 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SNX9Q9Y5X1 AC131212.4-201ENST00000623606 975 ntBASIC20.8■□□□□ 0.92
SNX9Q9Y5X1 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.8■□□□□ 0.92
SNX9Q9Y5X1 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
SNX9Q9Y5X1 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
SNX9Q9Y5X1 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SNX9Q9Y5X1 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SNX9Q9Y5X1 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.8■□□□□ 0.92
SNX9Q9Y5X1 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SNX9Q9Y5X1 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SNX9Q9Y5X1 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
SNX9Q9Y5X1 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SNX9Q9Y5X1 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SNX9Q9Y5X1 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.79■□□□□ 0.92
SNX9Q9Y5X1 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.79■□□□□ 0.92
SNX9Q9Y5X1 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.79■□□□□ 0.92
SNX9Q9Y5X1 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SNX9Q9Y5X1 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.79■□□□□ 0.92
SNX9Q9Y5X1 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SNX9Q9Y5X1 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SNX9Q9Y5X1 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SNX9Q9Y5X1 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SNX9Q9Y5X1 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.79■□□□□ 0.92
SNX9Q9Y5X1 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
SNX9Q9Y5X1 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SNX9Q9Y5X1 TSPY15P-201ENST00000457163 923 ntBASIC20.79■□□□□ 0.92
SNX9Q9Y5X1 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
SNX9Q9Y5X1 AL355075.4-201ENST00000554988 638 ntBASIC20.79■□□□□ 0.92
SNX9Q9Y5X1 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.79■□□□□ 0.92
SNX9Q9Y5X1 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
SNX9Q9Y5X1 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SNX9Q9Y5X1 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
SNX9Q9Y5X1 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SNX9Q9Y5X1 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.79■□□□□ 0.92
SNX9Q9Y5X1 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SNX9Q9Y5X1 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SNX9Q9Y5X1 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SNX9Q9Y5X1 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.78■□□□□ 0.92
SNX9Q9Y5X1 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.78■□□□□ 0.92
SNX9Q9Y5X1 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SNX9Q9Y5X1 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.78■□□□□ 0.92
SNX9Q9Y5X1 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SNX9Q9Y5X1 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.78■□□□□ 0.92
SNX9Q9Y5X1 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
SNX9Q9Y5X1 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SNX9Q9Y5X1 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.78■□□□□ 0.92
SNX9Q9Y5X1 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SNX9Q9Y5X1 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SNX9Q9Y5X1 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SNX9Q9Y5X1 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SNX9Q9Y5X1 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.78■□□□□ 0.92
SNX9Q9Y5X1 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.78■□□□□ 0.92
SNX9Q9Y5X1 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.78■□□□□ 0.92
SNX9Q9Y5X1 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SNX9Q9Y5X1 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SNX9Q9Y5X1 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.78■□□□□ 0.92
SNX9Q9Y5X1 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SNX9Q9Y5X1 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.78■□□□□ 0.92
SNX9Q9Y5X1 REXO1L10P-201ENST00000615707 1290 ntBASIC20.78■□□□□ 0.92
SNX9Q9Y5X1 REXO1L12P-201ENST00000622156 912 ntBASIC20.78■□□□□ 0.92
SNX9Q9Y5X1 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SNX9Q9Y5X1 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SNX9Q9Y5X1 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SNX9Q9Y5X1 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SNX9Q9Y5X1 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SNX9Q9Y5X1 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SNX9Q9Y5X1 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.77■□□□□ 0.92
SNX9Q9Y5X1 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.77■□□□□ 0.92
SNX9Q9Y5X1 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
SNX9Q9Y5X1 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
SNX9Q9Y5X1 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SNX9Q9Y5X1 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SNX9Q9Y5X1 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
SNX9Q9Y5X1 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms