Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC29.48■■■□□ 2.31
CDC42BPBQ9Y5S2 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC29.48■■■□□ 2.31
CDC42BPBQ9Y5S2 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
CDC42BPBQ9Y5S2 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC29.48■■■□□ 2.31
CDC42BPBQ9Y5S2 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
CDC42BPBQ9Y5S2 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC29.48■■■□□ 2.31
CDC42BPBQ9Y5S2 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC29.48■■■□□ 2.31
CDC42BPBQ9Y5S2 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
CDC42BPBQ9Y5S2 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC29.47■■■□□ 2.31
CDC42BPBQ9Y5S2 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC29.47■■■□□ 2.31
CDC42BPBQ9Y5S2 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC29.47■■■□□ 2.31
CDC42BPBQ9Y5S2 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC29.47■■■□□ 2.31
CDC42BPBQ9Y5S2 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
CDC42BPBQ9Y5S2 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
CDC42BPBQ9Y5S2 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC29.47■■■□□ 2.31
CDC42BPBQ9Y5S2 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC29.47■■■□□ 2.31
CDC42BPBQ9Y5S2 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
CDC42BPBQ9Y5S2 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC29.47■■■□□ 2.31
CDC42BPBQ9Y5S2 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC29.47■■■□□ 2.31
CDC42BPBQ9Y5S2 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
CDC42BPBQ9Y5S2 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC29.46■■■□□ 2.31
CDC42BPBQ9Y5S2 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC29.46■■■□□ 2.31
CDC42BPBQ9Y5S2 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC29.46■■■□□ 2.31
CDC42BPBQ9Y5S2 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
CDC42BPBQ9Y5S2 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC29.46■■■□□ 2.31
CDC42BPBQ9Y5S2 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
CDC42BPBQ9Y5S2 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC29.46■■■□□ 2.31
CDC42BPBQ9Y5S2 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC29.46■■■□□ 2.31
CDC42BPBQ9Y5S2 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC29.46■■■□□ 2.31
CDC42BPBQ9Y5S2 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC29.46■■■□□ 2.31
CDC42BPBQ9Y5S2 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
CDC42BPBQ9Y5S2 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
CDC42BPBQ9Y5S2 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
CDC42BPBQ9Y5S2 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC29.46■■■□□ 2.31
CDC42BPBQ9Y5S2 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC29.46■■■□□ 2.31
CDC42BPBQ9Y5S2 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
CDC42BPBQ9Y5S2 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC29.46■■■□□ 2.31
CDC42BPBQ9Y5S2 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC29.45■■■□□ 2.31
CDC42BPBQ9Y5S2 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC29.45■■■□□ 2.31
CDC42BPBQ9Y5S2 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
CDC42BPBQ9Y5S2 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
CDC42BPBQ9Y5S2 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC29.45■■■□□ 2.31
CDC42BPBQ9Y5S2 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
CDC42BPBQ9Y5S2 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
CDC42BPBQ9Y5S2 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC29.45■■■□□ 2.3
CDC42BPBQ9Y5S2 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
CDC42BPBQ9Y5S2 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC29.45■■■□□ 2.3
CDC42BPBQ9Y5S2 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC29.45■■■□□ 2.3
CDC42BPBQ9Y5S2 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC29.45■■■□□ 2.3
CDC42BPBQ9Y5S2 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC29.45■■■□□ 2.3
CDC42BPBQ9Y5S2 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC29.45■■■□□ 2.3
CDC42BPBQ9Y5S2 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC29.45■■■□□ 2.3
CDC42BPBQ9Y5S2 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
CDC42BPBQ9Y5S2 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC29.44■■■□□ 2.3
CDC42BPBQ9Y5S2 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
CDC42BPBQ9Y5S2 PP7080-204ENST00000510714 601 ntTSL 3 BASIC29.44■■■□□ 2.3
CDC42BPBQ9Y5S2 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC29.44■■■□□ 2.3
CDC42BPBQ9Y5S2 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC29.44■■■□□ 2.3
CDC42BPBQ9Y5S2 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC29.44■■■□□ 2.3
CDC42BPBQ9Y5S2 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC29.44■■■□□ 2.3
CDC42BPBQ9Y5S2 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC29.43■■■□□ 2.3
CDC42BPBQ9Y5S2 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC29.43■■■□□ 2.3
CDC42BPBQ9Y5S2 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC29.43■■■□□ 2.3
CDC42BPBQ9Y5S2 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC29.43■■■□□ 2.3
CDC42BPBQ9Y5S2 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
CDC42BPBQ9Y5S2 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
CDC42BPBQ9Y5S2 LINC01311-201ENST00000565162 1445 ntBASIC29.43■■■□□ 2.3
CDC42BPBQ9Y5S2 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC29.43■■■□□ 2.3
CDC42BPBQ9Y5S2 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
CDC42BPBQ9Y5S2 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
CDC42BPBQ9Y5S2 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC29.42■■■□□ 2.3
CDC42BPBQ9Y5S2 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
CDC42BPBQ9Y5S2 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC29.42■■■□□ 2.3
CDC42BPBQ9Y5S2 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
CDC42BPBQ9Y5S2 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC29.42■■■□□ 2.3
CDC42BPBQ9Y5S2 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC29.42■■■□□ 2.3
CDC42BPBQ9Y5S2 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
CDC42BPBQ9Y5S2 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
CDC42BPBQ9Y5S2 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
CDC42BPBQ9Y5S2 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC29.42■■■□□ 2.3
CDC42BPBQ9Y5S2 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC29.42■■■□□ 2.3
CDC42BPBQ9Y5S2 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC29.42■■■□□ 2.3
CDC42BPBQ9Y5S2 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC29.42■■■□□ 2.3
CDC42BPBQ9Y5S2 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC29.42■■■□□ 2.3
CDC42BPBQ9Y5S2 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC29.42■■■□□ 2.3
CDC42BPBQ9Y5S2 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
CDC42BPBQ9Y5S2 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC29.41■■■□□ 2.3
CDC42BPBQ9Y5S2 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC29.41■■■□□ 2.3
CDC42BPBQ9Y5S2 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
CDC42BPBQ9Y5S2 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC29.41■■■□□ 2.3
CDC42BPBQ9Y5S2 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC29.41■■■□□ 2.3
CDC42BPBQ9Y5S2 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC29.41■■■□□ 2.3
CDC42BPBQ9Y5S2 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
CDC42BPBQ9Y5S2 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
CDC42BPBQ9Y5S2 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC29.41■■■□□ 2.3
CDC42BPBQ9Y5S2 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC29.41■■■□□ 2.3
CDC42BPBQ9Y5S2 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
CDC42BPBQ9Y5S2 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
CDC42BPBQ9Y5S2 AL645929.1-201ENST00000420084 975 ntBASIC29.4■■■□□ 2.3
CDC42BPBQ9Y5S2 CR769767.2-201ENST00000622735 460 ntBASIC29.4■■■□□ 2.3
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms