Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.83■□□□□ 0.6
PCDHGA11Q9Y5H2 AL121829.2-201ENST00000620908 328 ntBASIC18.83■□□□□ 0.6
PCDHGA11Q9Y5H2 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHGA11Q9Y5H2 AP006587.1-201ENST00000534129 1502 ntBASIC18.83■□□□□ 0.6
PCDHGA11Q9Y5H2 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHGA11Q9Y5H2 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHGA11Q9Y5H2 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHGA11Q9Y5H2 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
PCDHGA11Q9Y5H2 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHGA11Q9Y5H2 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHGA11Q9Y5H2 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHGA11Q9Y5H2 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.83■□□□□ 0.6
PCDHGA11Q9Y5H2 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.83■□□□□ 0.6
PCDHGA11Q9Y5H2 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHGA11Q9Y5H2 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHGA11Q9Y5H2 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
PCDHGA11Q9Y5H2 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGA11Q9Y5H2 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.82■□□□□ 0.6
PCDHGA11Q9Y5H2 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.82■□□□□ 0.6
PCDHGA11Q9Y5H2 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGA11Q9Y5H2 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGA11Q9Y5H2 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGA11Q9Y5H2 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGA11Q9Y5H2 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.82■□□□□ 0.6
PCDHGA11Q9Y5H2 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.82■□□□□ 0.6
PCDHGA11Q9Y5H2 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.82■□□□□ 0.6
PCDHGA11Q9Y5H2 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDHGA11Q9Y5H2 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDHGA11Q9Y5H2 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGA11Q9Y5H2 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGA11Q9Y5H2 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGA11Q9Y5H2 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGA11Q9Y5H2 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
PCDHGA11Q9Y5H2 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDHGA11Q9Y5H2 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDHGA11Q9Y5H2 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGA11Q9Y5H2 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.82■□□□□ 0.6
PCDHGA11Q9Y5H2 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGA11Q9Y5H2 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGA11Q9Y5H2 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
PCDHGA11Q9Y5H2 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
PCDHGA11Q9Y5H2 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGA11Q9Y5H2 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.81■□□□□ 0.6
PCDHGA11Q9Y5H2 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGA11Q9Y5H2 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGA11Q9Y5H2 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.81■□□□□ 0.6
PCDHGA11Q9Y5H2 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PCDHGA11Q9Y5H2 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
PCDHGA11Q9Y5H2 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.81■□□□□ 0.6
PCDHGA11Q9Y5H2 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.81■□□□□ 0.6
PCDHGA11Q9Y5H2 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGA11Q9Y5H2 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGA11Q9Y5H2 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGA11Q9Y5H2 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGA11Q9Y5H2 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGA11Q9Y5H2 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.81■□□□□ 0.6
PCDHGA11Q9Y5H2 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
PCDHGA11Q9Y5H2 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
PCDHGA11Q9Y5H2 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGA11Q9Y5H2 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGA11Q9Y5H2 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PCDHGA11Q9Y5H2 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGA11Q9Y5H2 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.81■□□□□ 0.6
PCDHGA11Q9Y5H2 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
PCDHGA11Q9Y5H2 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGA11Q9Y5H2 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGA11Q9Y5H2 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDHGA11Q9Y5H2 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PCDHGA11Q9Y5H2 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGA11Q9Y5H2 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PCDHGA11Q9Y5H2 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGA11Q9Y5H2 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDHGA11Q9Y5H2 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGA11Q9Y5H2 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.8■□□□□ 0.6
PCDHGA11Q9Y5H2 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGA11Q9Y5H2 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGA11Q9Y5H2 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PCDHGA11Q9Y5H2 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGA11Q9Y5H2 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGA11Q9Y5H2 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.8■□□□□ 0.6
PCDHGA11Q9Y5H2 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PCDHGA11Q9Y5H2 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.8■□□□□ 0.6
PCDHGA11Q9Y5H2 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PCDHGA11Q9Y5H2 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDHGA11Q9Y5H2 YBX1P10-201ENST00000444752 975 ntBASIC18.8■□□□□ 0.6
PCDHGA11Q9Y5H2 UNC93B5-201ENST00000530315 699 ntBASIC18.8■□□□□ 0.6
PCDHGA11Q9Y5H2 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.8■□□□□ 0.6
PCDHGA11Q9Y5H2 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
PCDHGA11Q9Y5H2 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDHGA11Q9Y5H2 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.8■□□□□ 0.6
PCDHGA11Q9Y5H2 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDHGA11Q9Y5H2 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGA11Q9Y5H2 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDHGA11Q9Y5H2 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
PCDHGA11Q9Y5H2 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGA11Q9Y5H2 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGA11Q9Y5H2 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDHGA11Q9Y5H2 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGA11Q9Y5H2 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.8■□□□□ 0.6
PCDHGA11Q9Y5H2 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms