Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA3Q9Y5H0 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDHGA3Q9Y5H0 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDHGA3Q9Y5H0 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
PCDHGA3Q9Y5H0 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.86■□□□□ 0.61
PCDHGA3Q9Y5H0 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.86■□□□□ 0.61
PCDHGA3Q9Y5H0 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.86■□□□□ 0.61
PCDHGA3Q9Y5H0 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.86■□□□□ 0.61
PCDHGA3Q9Y5H0 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.86■□□□□ 0.61
PCDHGA3Q9Y5H0 AC005363.2-201ENST00000618631 242 ntBASIC18.86■□□□□ 0.61
PCDHGA3Q9Y5H0 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.86■□□□□ 0.61
PCDHGA3Q9Y5H0 AC092865.7-201ENST00000641832 219 ntBASIC18.86■□□□□ 0.61
PCDHGA3Q9Y5H0 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA3Q9Y5H0 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA3Q9Y5H0 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
PCDHGA3Q9Y5H0 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA3Q9Y5H0 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA3Q9Y5H0 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA3Q9Y5H0 AC006128.1-201ENST00000624704 1661 ntBASIC18.85■□□□□ 0.61
PCDHGA3Q9Y5H0 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGA3Q9Y5H0 PCDHAC2-203ENST00000615316 3011 ntBASIC18.85■□□□□ 0.61
PCDHGA3Q9Y5H0 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGA3Q9Y5H0 KRT8P17-201ENST00000453110 1448 ntBASIC18.85■□□□□ 0.61
PCDHGA3Q9Y5H0 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGA3Q9Y5H0 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.85■□□□□ 0.61
PCDHGA3Q9Y5H0 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGA3Q9Y5H0 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.85■□□□□ 0.61
PCDHGA3Q9Y5H0 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.85■□□□□ 0.61
PCDHGA3Q9Y5H0 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.85■□□□□ 0.61
PCDHGA3Q9Y5H0 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGA3Q9Y5H0 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.85■□□□□ 0.61
PCDHGA3Q9Y5H0 RN7SL850P-201ENST00000579959 291 ntBASIC18.85■□□□□ 0.61
PCDHGA3Q9Y5H0 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.85■□□□□ 0.61
PCDHGA3Q9Y5H0 AP000525.1-201ENST00000608286 694 ntBASIC18.85■□□□□ 0.61
PCDHGA3Q9Y5H0 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
PCDHGA3Q9Y5H0 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.85■□□□□ 0.61
PCDHGA3Q9Y5H0 MIR6786-201ENST00000616843 113 ntBASIC18.85■□□□□ 0.61
PCDHGA3Q9Y5H0 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGA3Q9Y5H0 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.85■□□□□ 0.61
PCDHGA3Q9Y5H0 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.85■□□□□ 0.61
PCDHGA3Q9Y5H0 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
PCDHGA3Q9Y5H0 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGA3Q9Y5H0 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA3Q9Y5H0 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA3Q9Y5H0 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.84■□□□□ 0.61
PCDHGA3Q9Y5H0 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA3Q9Y5H0 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA3Q9Y5H0 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA3Q9Y5H0 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA3Q9Y5H0 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA3Q9Y5H0 KRT16P1-201ENST00000399124 1418 ntBASIC18.84■□□□□ 0.61
PCDHGA3Q9Y5H0 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA3Q9Y5H0 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA3Q9Y5H0 AC087289.5-201ENST00000586076 3175 ntBASIC18.84■□□□□ 0.61
PCDHGA3Q9Y5H0 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA3Q9Y5H0 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA3Q9Y5H0 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.84■□□□□ 0.61
PCDHGA3Q9Y5H0 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.84■□□□□ 0.61
PCDHGA3Q9Y5H0 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDHGA3Q9Y5H0 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA3Q9Y5H0 FITM1-202ENST00000559294 800 ntBASIC18.84■□□□□ 0.61
PCDHGA3Q9Y5H0 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA3Q9Y5H0 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA3Q9Y5H0 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDHGA3Q9Y5H0 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA3Q9Y5H0 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.83■□□□□ 0.61
PCDHGA3Q9Y5H0 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.83■□□□□ 0.61
PCDHGA3Q9Y5H0 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.83■□□□□ 0.61
PCDHGA3Q9Y5H0 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.83■□□□□ 0.61
PCDHGA3Q9Y5H0 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.83■□□□□ 0.61
PCDHGA3Q9Y5H0 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCDHGA3Q9Y5H0 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.61
PCDHGA3Q9Y5H0 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PCDHGA3Q9Y5H0 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.83■□□□□ 0.61
PCDHGA3Q9Y5H0 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
PCDHGA3Q9Y5H0 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHGA3Q9Y5H0 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHGA3Q9Y5H0 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.83■□□□□ 0.6
PCDHGA3Q9Y5H0 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.83■□□□□ 0.6
PCDHGA3Q9Y5H0 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.83■□□□□ 0.6
PCDHGA3Q9Y5H0 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHGA3Q9Y5H0 CR392000.1-201ENST00000624770 1228 ntBASIC18.83■□□□□ 0.6
PCDHGA3Q9Y5H0 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHGA3Q9Y5H0 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHGA3Q9Y5H0 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHGA3Q9Y5H0 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.83■□□□□ 0.6
PCDHGA3Q9Y5H0 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHGA3Q9Y5H0 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHGA3Q9Y5H0 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.83■□□□□ 0.6
PCDHGA3Q9Y5H0 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHGA3Q9Y5H0 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHGA3Q9Y5H0 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHGA3Q9Y5H0 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGA3Q9Y5H0 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGA3Q9Y5H0 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGA3Q9Y5H0 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PCDHGA3Q9Y5H0 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGA3Q9Y5H0 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGA3Q9Y5H0 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGA3Q9Y5H0 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms