Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHB2Q9Y5E7 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
PCDHB2Q9Y5E7 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC21.28■■□□□ 1
PCDHB2Q9Y5E7 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC21.28■■□□□ 1
PCDHB2Q9Y5E7 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHB2Q9Y5E7 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHB2Q9Y5E7 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHB2Q9Y5E7 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHB2Q9Y5E7 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC21.27■■□□□ 1
PCDHB2Q9Y5E7 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHB2Q9Y5E7 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC21.27■■□□□ 1
PCDHB2Q9Y5E7 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHB2Q9Y5E7 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHB2Q9Y5E7 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHB2Q9Y5E7 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
PCDHB2Q9Y5E7 MIR1224-201ENST00000408193 85 ntBASIC21.27■■□□□ 1
PCDHB2Q9Y5E7 B3GAT3P1-201ENST00000471720 806 ntBASIC21.27■■□□□ 1
PCDHB2Q9Y5E7 AC011506.1-201ENST00000474329 610 ntBASIC21.27■■□□□ 1
PCDHB2Q9Y5E7 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC21.27■■□□□ 1
PCDHB2Q9Y5E7 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC21.27■■□□□ 1
PCDHB2Q9Y5E7 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC21.27■■□□□ 1
PCDHB2Q9Y5E7 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC21.27■■□□□ 1
PCDHB2Q9Y5E7 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC21.27■■□□□ 1
PCDHB2Q9Y5E7 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC21.27■■□□□ 1
PCDHB2Q9Y5E7 AC145285.6-201ENST00000604632 637 ntBASIC21.27■■□□□ 1
PCDHB2Q9Y5E7 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
PCDHB2Q9Y5E7 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC21.27■■□□□ 1
PCDHB2Q9Y5E7 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHB2Q9Y5E7 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.27■■□□□ 1
PCDHB2Q9Y5E7 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC21.27■■□□□ 1
PCDHB2Q9Y5E7 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC21.27■■□□□ 1
PCDHB2Q9Y5E7 AP001271.2-201ENST00000624018 1556 ntBASIC21.27■□□□□ 0.99
PCDHB2Q9Y5E7 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
PCDHB2Q9Y5E7 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
PCDHB2Q9Y5E7 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHB2Q9Y5E7 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC21.26■□□□□ 0.99
PCDHB2Q9Y5E7 CYP2D8P-201ENST00000433633 1490 ntBASIC21.26■□□□□ 0.99
PCDHB2Q9Y5E7 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHB2Q9Y5E7 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHB2Q9Y5E7 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.26■□□□□ 0.99
PCDHB2Q9Y5E7 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHB2Q9Y5E7 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHB2Q9Y5E7 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHB2Q9Y5E7 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC21.26■□□□□ 0.99
PCDHB2Q9Y5E7 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC21.26■□□□□ 0.99
PCDHB2Q9Y5E7 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC21.26■□□□□ 0.99
PCDHB2Q9Y5E7 HLA-A-209ENST00000638375 975 ntBASIC21.26■□□□□ 0.99
PCDHB2Q9Y5E7 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHB2Q9Y5E7 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
PCDHB2Q9Y5E7 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHB2Q9Y5E7 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHB2Q9Y5E7 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHB2Q9Y5E7 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHB2Q9Y5E7 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC21.25■□□□□ 0.99
PCDHB2Q9Y5E7 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
PCDHB2Q9Y5E7 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC21.25■□□□□ 0.99
PCDHB2Q9Y5E7 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
PCDHB2Q9Y5E7 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHB2Q9Y5E7 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
PCDHB2Q9Y5E7 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHB2Q9Y5E7 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC21.25■□□□□ 0.99
PCDHB2Q9Y5E7 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC21.25■□□□□ 0.99
PCDHB2Q9Y5E7 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC21.25■□□□□ 0.99
PCDHB2Q9Y5E7 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC21.25■□□□□ 0.99
PCDHB2Q9Y5E7 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHB2Q9Y5E7 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC21.25■□□□□ 0.99
PCDHB2Q9Y5E7 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC21.25■□□□□ 0.99
PCDHB2Q9Y5E7 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
PCDHB2Q9Y5E7 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
PCDHB2Q9Y5E7 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHB2Q9Y5E7 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHB2Q9Y5E7 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHB2Q9Y5E7 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHB2Q9Y5E7 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
PCDHB2Q9Y5E7 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHB2Q9Y5E7 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC21.24■□□□□ 0.99
PCDHB2Q9Y5E7 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
PCDHB2Q9Y5E7 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.24■□□□□ 0.99
PCDHB2Q9Y5E7 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHB2Q9Y5E7 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
PCDHB2Q9Y5E7 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC21.24■□□□□ 0.99
PCDHB2Q9Y5E7 NAPSB-206ENST00000562112 1266 ntBASIC21.24■□□□□ 0.99
PCDHB2Q9Y5E7 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC21.24■□□□□ 0.99
PCDHB2Q9Y5E7 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHB2Q9Y5E7 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHB2Q9Y5E7 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHB2Q9Y5E7 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHB2Q9Y5E7 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
PCDHB2Q9Y5E7 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC21.24■□□□□ 0.99
PCDHB2Q9Y5E7 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
PCDHB2Q9Y5E7 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHB2Q9Y5E7 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHB2Q9Y5E7 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHB2Q9Y5E7 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHB2Q9Y5E7 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHB2Q9Y5E7 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHB2Q9Y5E7 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHB2Q9Y5E7 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHB2Q9Y5E7 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHB2Q9Y5E7 LINC01568-207ENST00000641790 1380 ntBASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms