Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
PKP3Q9Y446 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.5■□□□□ 0.71
PKP3Q9Y446 KRT16P5-201ENST00000455284 522 ntBASIC19.5■□□□□ 0.71
PKP3Q9Y446 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
PKP3Q9Y446 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.5■□□□□ 0.71
PKP3Q9Y446 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.5■□□□□ 0.71
PKP3Q9Y446 FAM197Y4-202ENST00000622692 608 ntBASIC19.5■□□□□ 0.71
PKP3Q9Y446 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PKP3Q9Y446 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
PKP3Q9Y446 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PKP3Q9Y446 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.5■□□□□ 0.71
PKP3Q9Y446 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
PKP3Q9Y446 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PKP3Q9Y446 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.49■□□□□ 0.71
PKP3Q9Y446 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.49■□□□□ 0.71
PKP3Q9Y446 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PKP3Q9Y446 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PKP3Q9Y446 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PKP3Q9Y446 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PKP3Q9Y446 PRORSD1P-201ENST00000295112 541 ntBASIC19.49■□□□□ 0.71
PKP3Q9Y446 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PKP3Q9Y446 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
PKP3Q9Y446 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.49■□□□□ 0.71
PKP3Q9Y446 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.49■□□□□ 0.71
PKP3Q9Y446 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.49■□□□□ 0.71
PKP3Q9Y446 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.49■□□□□ 0.71
PKP3Q9Y446 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PKP3Q9Y446 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PKP3Q9Y446 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PKP3Q9Y446 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PKP3Q9Y446 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PKP3Q9Y446 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
PKP3Q9Y446 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
PKP3Q9Y446 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PKP3Q9Y446 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.48■□□□□ 0.71
PKP3Q9Y446 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PKP3Q9Y446 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.48■□□□□ 0.71
PKP3Q9Y446 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
PKP3Q9Y446 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.48■□□□□ 0.71
PKP3Q9Y446 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.48■□□□□ 0.71
PKP3Q9Y446 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PKP3Q9Y446 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.48■□□□□ 0.71
PKP3Q9Y446 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PKP3Q9Y446 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PKP3Q9Y446 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.48■□□□□ 0.71
PKP3Q9Y446 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.48■□□□□ 0.71
PKP3Q9Y446 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.48■□□□□ 0.71
PKP3Q9Y446 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
PKP3Q9Y446 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.47■□□□□ 0.71
PKP3Q9Y446 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PKP3Q9Y446 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.47■□□□□ 0.71
PKP3Q9Y446 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PKP3Q9Y446 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
PKP3Q9Y446 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PKP3Q9Y446 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
PKP3Q9Y446 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PKP3Q9Y446 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.47■□□□□ 0.71
PKP3Q9Y446 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PKP3Q9Y446 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PKP3Q9Y446 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
PKP3Q9Y446 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PKP3Q9Y446 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
PKP3Q9Y446 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PKP3Q9Y446 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.47■□□□□ 0.71
PKP3Q9Y446 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PKP3Q9Y446 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PKP3Q9Y446 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.47■□□□□ 0.71
PKP3Q9Y446 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PKP3Q9Y446 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.46■□□□□ 0.71
PKP3Q9Y446 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.46■□□□□ 0.71
PKP3Q9Y446 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PKP3Q9Y446 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PKP3Q9Y446 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
PKP3Q9Y446 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
PKP3Q9Y446 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.46■□□□□ 0.71
PKP3Q9Y446 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.46■□□□□ 0.71
PKP3Q9Y446 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
PKP3Q9Y446 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PKP3Q9Y446 AC142381.4-202ENST00000563973 229 ntBASIC19.46■□□□□ 0.71
PKP3Q9Y446 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.46■□□□□ 0.71
PKP3Q9Y446 AL359736.2-201ENST00000621992 437 ntBASIC19.46■□□□□ 0.71
PKP3Q9Y446 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PKP3Q9Y446 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.46■□□□□ 0.71
PKP3Q9Y446 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
PKP3Q9Y446 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PKP3Q9Y446 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PKP3Q9Y446 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PKP3Q9Y446 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PKP3Q9Y446 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.7
PKP3Q9Y446 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PKP3Q9Y446 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PKP3Q9Y446 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
PKP3Q9Y446 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PKP3Q9Y446 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
PKP3Q9Y446 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PKP3Q9Y446 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
PKP3Q9Y446 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
PKP3Q9Y446 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PKP3Q9Y446 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.45■□□□□ 0.7
PKP3Q9Y446 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms