Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SPG7Q9UQ90 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SPG7Q9UQ90 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC25.4■■□□□ 1.66
SPG7Q9UQ90 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC25.4■■□□□ 1.66
SPG7Q9UQ90 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC25.4■■□□□ 1.66
SPG7Q9UQ90 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SPG7Q9UQ90 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC25.4■■□□□ 1.66
SPG7Q9UQ90 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC25.4■■□□□ 1.66
SPG7Q9UQ90 AC009237.14-201ENST00000609975 1594 ntBASIC25.39■■□□□ 1.66
SPG7Q9UQ90 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC25.39■■□□□ 1.66
SPG7Q9UQ90 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC25.39■■□□□ 1.66
SPG7Q9UQ90 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
SPG7Q9UQ90 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.66
SPG7Q9UQ90 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
SPG7Q9UQ90 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC25.39■■□□□ 1.66
SPG7Q9UQ90 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
SPG7Q9UQ90 HOMER2P1-201ENST00000455653 964 ntBASIC25.39■■□□□ 1.66
SPG7Q9UQ90 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC25.39■■□□□ 1.66
SPG7Q9UQ90 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC25.39■■□□□ 1.66
SPG7Q9UQ90 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC25.39■■□□□ 1.66
SPG7Q9UQ90 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
SPG7Q9UQ90 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
SPG7Q9UQ90 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC25.39■■□□□ 1.66
SPG7Q9UQ90 USF2-205ENST00000594064 1179 ntTSL 2 BASIC25.39■■□□□ 1.66
SPG7Q9UQ90 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC25.39■■□□□ 1.66
SPG7Q9UQ90 AC140113.3-201ENST00000605663 199 ntBASIC25.39■■□□□ 1.66
SPG7Q9UQ90 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
SPG7Q9UQ90 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
SPG7Q9UQ90 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.65
SPG7Q9UQ90 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
SPG7Q9UQ90 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
SPG7Q9UQ90 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC25.38■■□□□ 1.65
SPG7Q9UQ90 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
SPG7Q9UQ90 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
SPG7Q9UQ90 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC25.38■■□□□ 1.65
SPG7Q9UQ90 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SPG7Q9UQ90 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
SPG7Q9UQ90 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SPG7Q9UQ90 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
SPG7Q9UQ90 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC25.38■■□□□ 1.65
SPG7Q9UQ90 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SPG7Q9UQ90 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
SPG7Q9UQ90 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC25.38■■□□□ 1.65
SPG7Q9UQ90 DBP-204ENST00000599385 709 ntTSL 3 BASIC25.38■■□□□ 1.65
SPG7Q9UQ90 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC25.38■■□□□ 1.65
SPG7Q9UQ90 AP000550.4-202ENST00000639755 178 ntBASIC25.38■■□□□ 1.65
SPG7Q9UQ90 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
SPG7Q9UQ90 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
SPG7Q9UQ90 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC25.38■■□□□ 1.65
SPG7Q9UQ90 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC25.38■■□□□ 1.65
SPG7Q9UQ90 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
SPG7Q9UQ90 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC25.38■■□□□ 1.65
SPG7Q9UQ90 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
SPG7Q9UQ90 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC25.37■■□□□ 1.65
SPG7Q9UQ90 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
SPG7Q9UQ90 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
SPG7Q9UQ90 PALM-208ENST00000592155 2272 ntTSL 4 BASIC25.37■■□□□ 1.65
SPG7Q9UQ90 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
SPG7Q9UQ90 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC25.37■■□□□ 1.65
SPG7Q9UQ90 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC25.37■■□□□ 1.65
SPG7Q9UQ90 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SPG7Q9UQ90 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SPG7Q9UQ90 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC25.37■■□□□ 1.65
SPG7Q9UQ90 NMU-205ENST00000511469 756 ntTSL 3 BASIC25.37■■□□□ 1.65
SPG7Q9UQ90 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC25.37■■□□□ 1.65
SPG7Q9UQ90 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
SPG7Q9UQ90 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SPG7Q9UQ90 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
SPG7Q9UQ90 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC25.37■■□□□ 1.65
SPG7Q9UQ90 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SPG7Q9UQ90 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC25.37■■□□□ 1.65
SPG7Q9UQ90 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
SPG7Q9UQ90 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
SPG7Q9UQ90 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
SPG7Q9UQ90 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC25.36■■□□□ 1.65
SPG7Q9UQ90 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
SPG7Q9UQ90 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
SPG7Q9UQ90 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC25.36■■□□□ 1.65
SPG7Q9UQ90 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
SPG7Q9UQ90 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
SPG7Q9UQ90 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
SPG7Q9UQ90 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC25.36■■□□□ 1.65
SPG7Q9UQ90 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC25.36■■□□□ 1.65
SPG7Q9UQ90 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC25.36■■□□□ 1.65
SPG7Q9UQ90 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC25.36■■□□□ 1.65
SPG7Q9UQ90 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
SPG7Q9UQ90 AL023973.1-201ENST00000624619 620 ntBASIC25.36■■□□□ 1.65
SPG7Q9UQ90 AL121956.5-201ENST00000625261 221 ntBASIC25.36■■□□□ 1.65
SPG7Q9UQ90 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC25.36■■□□□ 1.65
SPG7Q9UQ90 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC25.36■■□□□ 1.65
SPG7Q9UQ90 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
SPG7Q9UQ90 AL691432.2-201ENST00000607222 2038 ntBASIC25.36■■□□□ 1.65
SPG7Q9UQ90 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SPG7Q9UQ90 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
SPG7Q9UQ90 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
SPG7Q9UQ90 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
SPG7Q9UQ90 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC25.35■■□□□ 1.65
SPG7Q9UQ90 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SPG7Q9UQ90 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SPG7Q9UQ90 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms