Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC23.58■■□□□ 1.36
ZC3H4Q9UPT8 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
ZC3H4Q9UPT8 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC23.57■■□□□ 1.36
ZC3H4Q9UPT8 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
ZC3H4Q9UPT8 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
ZC3H4Q9UPT8 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
ZC3H4Q9UPT8 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
ZC3H4Q9UPT8 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC23.57■■□□□ 1.36
ZC3H4Q9UPT8 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC23.57■■□□□ 1.36
ZC3H4Q9UPT8 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
ZC3H4Q9UPT8 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
ZC3H4Q9UPT8 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
ZC3H4Q9UPT8 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
ZC3H4Q9UPT8 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
ZC3H4Q9UPT8 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
ZC3H4Q9UPT8 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
ZC3H4Q9UPT8 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC23.57■■□□□ 1.36
ZC3H4Q9UPT8 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC23.57■■□□□ 1.36
ZC3H4Q9UPT8 AC117500.6-201ENST00000624871 588 ntBASIC23.57■■□□□ 1.36
ZC3H4Q9UPT8 KRT18P1-202ENST00000452408 1331 ntBASIC23.57■■□□□ 1.36
ZC3H4Q9UPT8 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
ZC3H4Q9UPT8 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
ZC3H4Q9UPT8 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
ZC3H4Q9UPT8 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
ZC3H4Q9UPT8 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC23.56■■□□□ 1.36
ZC3H4Q9UPT8 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
ZC3H4Q9UPT8 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC23.56■■□□□ 1.36
ZC3H4Q9UPT8 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
ZC3H4Q9UPT8 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC23.56■■□□□ 1.36
ZC3H4Q9UPT8 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
ZC3H4Q9UPT8 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC23.56■■□□□ 1.36
ZC3H4Q9UPT8 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
ZC3H4Q9UPT8 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
ZC3H4Q9UPT8 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
ZC3H4Q9UPT8 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC23.56■■□□□ 1.36
ZC3H4Q9UPT8 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
ZC3H4Q9UPT8 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC23.56■■□□□ 1.36
ZC3H4Q9UPT8 DYM-203ENST00000442713 2147 ntTSL 2 BASIC23.56■■□□□ 1.36
ZC3H4Q9UPT8 BX276092.5-203ENST00000456199 560 ntBASIC23.56■■□□□ 1.36
ZC3H4Q9UPT8 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC23.56■■□□□ 1.36
ZC3H4Q9UPT8 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC23.56■■□□□ 1.36
ZC3H4Q9UPT8 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC23.56■■□□□ 1.36
ZC3H4Q9UPT8 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC23.56■■□□□ 1.36
ZC3H4Q9UPT8 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
ZC3H4Q9UPT8 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
ZC3H4Q9UPT8 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC23.55■■□□□ 1.36
ZC3H4Q9UPT8 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC23.55■■□□□ 1.36
ZC3H4Q9UPT8 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
ZC3H4Q9UPT8 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC23.55■■□□□ 1.36
ZC3H4Q9UPT8 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
ZC3H4Q9UPT8 TSPY19P-201ENST00000418461 509 ntBASIC23.55■■□□□ 1.36
ZC3H4Q9UPT8 TSPY18P-201ENST00000441642 509 ntBASIC23.55■■□□□ 1.36
ZC3H4Q9UPT8 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC23.55■■□□□ 1.36
ZC3H4Q9UPT8 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC23.55■■□□□ 1.36
ZC3H4Q9UPT8 AC139530.3-201ENST00000620344 690 ntBASIC23.55■■□□□ 1.36
ZC3H4Q9UPT8 MYB-221ENST00000527615 2381 ntTSL 5 BASIC23.55■■□□□ 1.36
ZC3H4Q9UPT8 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC23.54■■□□□ 1.36
ZC3H4Q9UPT8 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
ZC3H4Q9UPT8 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
ZC3H4Q9UPT8 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC23.54■■□□□ 1.36
ZC3H4Q9UPT8 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC23.54■■□□□ 1.36
ZC3H4Q9UPT8 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
ZC3H4Q9UPT8 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC23.54■■□□□ 1.36
ZC3H4Q9UPT8 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC23.54■■□□□ 1.36
ZC3H4Q9UPT8 AC016734.2-201ENST00000624325 1377 ntBASIC23.54■■□□□ 1.36
ZC3H4Q9UPT8 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
ZC3H4Q9UPT8 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC23.54■■□□□ 1.36
ZC3H4Q9UPT8 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
ZC3H4Q9UPT8 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
ZC3H4Q9UPT8 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
ZC3H4Q9UPT8 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
ZC3H4Q9UPT8 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
ZC3H4Q9UPT8 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC23.53■■□□□ 1.36
ZC3H4Q9UPT8 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
ZC3H4Q9UPT8 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC23.53■■□□□ 1.36
ZC3H4Q9UPT8 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC23.53■■□□□ 1.36
ZC3H4Q9UPT8 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC23.53■■□□□ 1.36
ZC3H4Q9UPT8 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
ZC3H4Q9UPT8 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
ZC3H4Q9UPT8 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC23.53■■□□□ 1.36
ZC3H4Q9UPT8 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC23.53■■□□□ 1.36
ZC3H4Q9UPT8 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC23.53■■□□□ 1.36
ZC3H4Q9UPT8 AP002383.4-201ENST00000442518 975 ntBASIC23.53■■□□□ 1.36
ZC3H4Q9UPT8 EMBP1-201ENST00000458200 901 ntBASIC23.53■■□□□ 1.36
ZC3H4Q9UPT8 AL662844.1-201ENST00000546340 181 ntBASIC23.53■■□□□ 1.36
ZC3H4Q9UPT8 AC011498.5-201ENST00000592027 486 ntBASIC23.53■■□□□ 1.36
ZC3H4Q9UPT8 SLC25A24-204ENST00000569674 2357 ntBASIC23.53■■□□□ 1.36
ZC3H4Q9UPT8 BX119927.1-201ENST00000636596 1552 ntBASIC23.53■■□□□ 1.36
ZC3H4Q9UPT8 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC23.52■■□□□ 1.36
ZC3H4Q9UPT8 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
ZC3H4Q9UPT8 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
ZC3H4Q9UPT8 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
ZC3H4Q9UPT8 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
ZC3H4Q9UPT8 MED17-221ENST00000639724 2317 ntTSL 5 BASIC23.52■■□□□ 1.36
ZC3H4Q9UPT8 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC23.52■■□□□ 1.36
ZC3H4Q9UPT8 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
ZC3H4Q9UPT8 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
ZC3H4Q9UPT8 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
ZC3H4Q9UPT8 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
ZC3H4Q9UPT8 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC23.52■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms