Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
DUX4Q9UBX2 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
DUX4Q9UBX2 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC17.04■□□□□ 0.32
DUX4Q9UBX2 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
DUX4Q9UBX2 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DUX4Q9UBX2 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
DUX4Q9UBX2 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
DUX4Q9UBX2 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
DUX4Q9UBX2 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
DUX4Q9UBX2 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.03■□□□□ 0.32
DUX4Q9UBX2 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.03■□□□□ 0.32
DUX4Q9UBX2 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
DUX4Q9UBX2 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.03■□□□□ 0.32
DUX4Q9UBX2 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
DUX4Q9UBX2 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DUX4Q9UBX2 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DUX4Q9UBX2 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.03■□□□□ 0.32
DUX4Q9UBX2 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.03■□□□□ 0.32
DUX4Q9UBX2 ID1-201ENST00000376105 1233 ntBASIC17.03■□□□□ 0.32
DUX4Q9UBX2 AL512625.2-201ENST00000417533 625 ntBASIC17.03■□□□□ 0.32
DUX4Q9UBX2 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.03■□□□□ 0.32
DUX4Q9UBX2 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.03■□□□□ 0.32
DUX4Q9UBX2 CYP2T3P-201ENST00000601990 817 ntBASIC17.03■□□□□ 0.32
DUX4Q9UBX2 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DUX4Q9UBX2 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.03■□□□□ 0.32
DUX4Q9UBX2 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.03■□□□□ 0.32
DUX4Q9UBX2 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
DUX4Q9UBX2 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.03■□□□□ 0.32
DUX4Q9UBX2 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
DUX4Q9UBX2 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
DUX4Q9UBX2 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DUX4Q9UBX2 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DUX4Q9UBX2 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
DUX4Q9UBX2 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
DUX4Q9UBX2 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.03■□□□□ 0.32
DUX4Q9UBX2 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
DUX4Q9UBX2 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
DUX4Q9UBX2 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
DUX4Q9UBX2 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
DUX4Q9UBX2 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
DUX4Q9UBX2 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
DUX4Q9UBX2 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.02■□□□□ 0.32
DUX4Q9UBX2 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
DUX4Q9UBX2 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
DUX4Q9UBX2 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
DUX4Q9UBX2 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.02■□□□□ 0.32
DUX4Q9UBX2 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
DUX4Q9UBX2 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.02■□□□□ 0.32
DUX4Q9UBX2 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
DUX4Q9UBX2 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
DUX4Q9UBX2 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
DUX4Q9UBX2 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
DUX4Q9UBX2 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
DUX4Q9UBX2 BX276092.2-201ENST00000417668 665 ntBASIC17.02■□□□□ 0.32
DUX4Q9UBX2 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC17.02■□□□□ 0.32
DUX4Q9UBX2 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
DUX4Q9UBX2 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.02■□□□□ 0.32
DUX4Q9UBX2 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC17.02■□□□□ 0.32
DUX4Q9UBX2 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.02■□□□□ 0.32
DUX4Q9UBX2 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
DUX4Q9UBX2 MIR2861-201ENST00000636310 90 ntBASIC17.02■□□□□ 0.32
DUX4Q9UBX2 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
DUX4Q9UBX2 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
DUX4Q9UBX2 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.02■□□□□ 0.31
DUX4Q9UBX2 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
DUX4Q9UBX2 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
DUX4Q9UBX2 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
DUX4Q9UBX2 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
DUX4Q9UBX2 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
DUX4Q9UBX2 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
DUX4Q9UBX2 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
DUX4Q9UBX2 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
DUX4Q9UBX2 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
DUX4Q9UBX2 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
DUX4Q9UBX2 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
DUX4Q9UBX2 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
DUX4Q9UBX2 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
DUX4Q9UBX2 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.01■□□□□ 0.31
DUX4Q9UBX2 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
DUX4Q9UBX2 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
DUX4Q9UBX2 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.01■□□□□ 0.31
DUX4Q9UBX2 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
DUX4Q9UBX2 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.01■□□□□ 0.31
DUX4Q9UBX2 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.01■□□□□ 0.31
DUX4Q9UBX2 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
DUX4Q9UBX2 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
DUX4Q9UBX2 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
DUX4Q9UBX2 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
DUX4Q9UBX2 MCRIP2P1-201ENST00000394346 511 ntBASIC17.01■□□□□ 0.31
DUX4Q9UBX2 AL355802.2-201ENST00000402069 882 ntBASIC17.01■□□□□ 0.31
DUX4Q9UBX2 MIPEPP3-201ENST00000412105 444 ntBASIC17.01■□□□□ 0.31
DUX4Q9UBX2 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.01■□□□□ 0.31
DUX4Q9UBX2 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC17.01■□□□□ 0.31
DUX4Q9UBX2 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.01■□□□□ 0.31
DUX4Q9UBX2 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.01■□□□□ 0.31
DUX4Q9UBX2 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC17.01■□□□□ 0.31
DUX4Q9UBX2 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC17.01■□□□□ 0.31
DUX4Q9UBX2 AC087633.2-202ENST00000565166 1439 ntBASIC17.01■□□□□ 0.31
DUX4Q9UBX2 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
DUX4Q9UBX2 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms