Protein–RNA interactions for Protein: Q9UBE8

NLK, Serine/threonine-protein kinase NLK, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLKQ9UBE8 CYP2T1P-201ENST00000432607 1285 ntBASIC17.2■□□□□ 0.34
NLKQ9UBE8 DLX3-202ENST00000512495 834 ntTSL 2 BASIC17.2■□□□□ 0.34
NLKQ9UBE8 VPS53-216ENST00000574029 585 ntTSL 4 BASIC17.2■□□□□ 0.34
NLKQ9UBE8 AC069236.1-201ENST00000604339 616 ntBASIC17.2■□□□□ 0.34
NLKQ9UBE8 AC016405.3-201ENST00000607710 860 ntBASIC17.2■□□□□ 0.34
NLKQ9UBE8 AC092666.2-201ENST00000613287 246 ntBASIC17.2■□□□□ 0.34
NLKQ9UBE8 AC008694.1-202ENST00000636953 945 ntBASIC17.2■□□□□ 0.34
NLKQ9UBE8 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
NLKQ9UBE8 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
NLKQ9UBE8 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.2■□□□□ 0.34
NLKQ9UBE8 AL032819.2-201ENST00000624543 2162 ntBASIC17.2■□□□□ 0.34
NLKQ9UBE8 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.2■□□□□ 0.34
NLKQ9UBE8 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.2■□□□□ 0.34
NLKQ9UBE8 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
NLKQ9UBE8 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NLKQ9UBE8 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
NLKQ9UBE8 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NLKQ9UBE8 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
NLKQ9UBE8 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
NLKQ9UBE8 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.19■□□□□ 0.34
NLKQ9UBE8 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
NLKQ9UBE8 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.19■□□□□ 0.34
NLKQ9UBE8 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
NLKQ9UBE8 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.19■□□□□ 0.34
NLKQ9UBE8 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NLKQ9UBE8 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NLKQ9UBE8 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
NLKQ9UBE8 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.19■□□□□ 0.34
NLKQ9UBE8 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NLKQ9UBE8 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NLKQ9UBE8 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NLKQ9UBE8 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
NLKQ9UBE8 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NLKQ9UBE8 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.19■□□□□ 0.34
NLKQ9UBE8 RARRES2P4-201ENST00000514074 484 ntBASIC17.19■□□□□ 0.34
NLKQ9UBE8 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NLKQ9UBE8 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
NLKQ9UBE8 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
NLKQ9UBE8 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NLKQ9UBE8 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NLKQ9UBE8 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NLKQ9UBE8 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NLKQ9UBE8 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
NLKQ9UBE8 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.19■□□□□ 0.34
NLKQ9UBE8 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NLKQ9UBE8 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NLKQ9UBE8 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC17.18■□□□□ 0.34
NLKQ9UBE8 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NLKQ9UBE8 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NLKQ9UBE8 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NLKQ9UBE8 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NLKQ9UBE8 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
NLKQ9UBE8 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.18■□□□□ 0.34
NLKQ9UBE8 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.18■□□□□ 0.34
NLKQ9UBE8 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.18■□□□□ 0.34
NLKQ9UBE8 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NLKQ9UBE8 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NLKQ9UBE8 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.18■□□□□ 0.34
NLKQ9UBE8 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.18■□□□□ 0.34
NLKQ9UBE8 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NLKQ9UBE8 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
NLKQ9UBE8 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.18■□□□□ 0.34
NLKQ9UBE8 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NLKQ9UBE8 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NLKQ9UBE8 APTR-203ENST00000430801 583 ntTSL 5 BASIC17.18■□□□□ 0.34
NLKQ9UBE8 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NLKQ9UBE8 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC17.18■□□□□ 0.34
NLKQ9UBE8 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.18■□□□□ 0.34
NLKQ9UBE8 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NLKQ9UBE8 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC17.18■□□□□ 0.34
NLKQ9UBE8 AC005181.1-201ENST00000604782 1256 ntBASIC17.18■□□□□ 0.34
NLKQ9UBE8 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC17.18■□□□□ 0.34
NLKQ9UBE8 MIR2861-201ENST00000636310 90 ntBASIC17.18■□□□□ 0.34
NLKQ9UBE8 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
NLKQ9UBE8 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NLKQ9UBE8 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.18■□□□□ 0.34
NLKQ9UBE8 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
NLKQ9UBE8 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
NLKQ9UBE8 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NLKQ9UBE8 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.18■□□□□ 0.34
NLKQ9UBE8 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NLKQ9UBE8 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NLKQ9UBE8 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.18■□□□□ 0.34
NLKQ9UBE8 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.18■□□□□ 0.34
NLKQ9UBE8 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
NLKQ9UBE8 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
NLKQ9UBE8 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC17.17■□□□□ 0.34
NLKQ9UBE8 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NLKQ9UBE8 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.17■□□□□ 0.34
NLKQ9UBE8 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.17■□□□□ 0.34
NLKQ9UBE8 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NLKQ9UBE8 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
NLKQ9UBE8 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NLKQ9UBE8 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NLKQ9UBE8 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NLKQ9UBE8 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NLKQ9UBE8 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
NLKQ9UBE8 CDCA4P2-201ENST00000441182 718 ntBASIC17.17■□□□□ 0.34
NLKQ9UBE8 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.17■□□□□ 0.34
NLKQ9UBE8 CROCCP3-202ENST00000420820 1947 ntBASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms