Protein–RNA interactions for Protein: Q9NZ94

NLGN3, Neuroligin-3, humanhuman

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLGN3Q9NZ94 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
NLGN3Q9NZ94 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
NLGN3Q9NZ94 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
NLGN3Q9NZ94 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
NLGN3Q9NZ94 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
NLGN3Q9NZ94 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NLGN3Q9NZ94 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NLGN3Q9NZ94 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NLGN3Q9NZ94 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
NLGN3Q9NZ94 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.01■□□□□ 0.63
NLGN3Q9NZ94 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.01■□□□□ 0.63
NLGN3Q9NZ94 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NLGN3Q9NZ94 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
NLGN3Q9NZ94 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.01■□□□□ 0.63
NLGN3Q9NZ94 FAM207BP-201ENST00000447172 505 ntBASIC19.01■□□□□ 0.63
NLGN3Q9NZ94 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.01■□□□□ 0.63
NLGN3Q9NZ94 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NLGN3Q9NZ94 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.01■□□□□ 0.63
NLGN3Q9NZ94 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.01■□□□□ 0.63
NLGN3Q9NZ94 NTF6B-201ENST00000591913 560 ntBASIC19.01■□□□□ 0.63
NLGN3Q9NZ94 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
NLGN3Q9NZ94 FAM87A-204ENST00000613235 858 ntBASIC19.01■□□□□ 0.63
NLGN3Q9NZ94 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NLGN3Q9NZ94 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NLGN3Q9NZ94 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.01■□□□□ 0.63
NLGN3Q9NZ94 AC096733.2-201ENST00000609937 1394 ntBASIC19.01■□□□□ 0.63
NLGN3Q9NZ94 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NLGN3Q9NZ94 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
NLGN3Q9NZ94 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.01■□□□□ 0.63
NLGN3Q9NZ94 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NLGN3Q9NZ94 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
NLGN3Q9NZ94 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.01■□□□□ 0.63
NLGN3Q9NZ94 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
NLGN3Q9NZ94 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
NLGN3Q9NZ94 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NLGN3Q9NZ94 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NLGN3Q9NZ94 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NLGN3Q9NZ94 MFAP1P1-201ENST00000442257 1255 ntBASIC19■□□□□ 0.63
NLGN3Q9NZ94 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19■□□□□ 0.63
NLGN3Q9NZ94 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
NLGN3Q9NZ94 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19■□□□□ 0.63
NLGN3Q9NZ94 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19■□□□□ 0.63
NLGN3Q9NZ94 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19■□□□□ 0.63
NLGN3Q9NZ94 AC006011.2-201ENST00000621313 1158 ntBASIC19■□□□□ 0.63
NLGN3Q9NZ94 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19■□□□□ 0.63
NLGN3Q9NZ94 GABARAPL3-202ENST00000624044 1851 ntBASIC19■□□□□ 0.63
NLGN3Q9NZ94 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NLGN3Q9NZ94 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
NLGN3Q9NZ94 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19■□□□□ 0.63
NLGN3Q9NZ94 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19■□□□□ 0.63
NLGN3Q9NZ94 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NLGN3Q9NZ94 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
NLGN3Q9NZ94 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
NLGN3Q9NZ94 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19■□□□□ 0.63
NLGN3Q9NZ94 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NLGN3Q9NZ94 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19■□□□□ 0.63
NLGN3Q9NZ94 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19■□□□□ 0.63
NLGN3Q9NZ94 KRT8P8-201ENST00000434750 1448 ntBASIC19■□□□□ 0.63
NLGN3Q9NZ94 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19■□□□□ 0.63
NLGN3Q9NZ94 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NLGN3Q9NZ94 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.99■□□□□ 0.63
NLGN3Q9NZ94 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
NLGN3Q9NZ94 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
NLGN3Q9NZ94 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NLGN3Q9NZ94 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NLGN3Q9NZ94 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.99■□□□□ 0.63
NLGN3Q9NZ94 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
NLGN3Q9NZ94 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NLGN3Q9NZ94 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
NLGN3Q9NZ94 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.99■□□□□ 0.63
NLGN3Q9NZ94 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NLGN3Q9NZ94 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NLGN3Q9NZ94 HMGA1P5-201ENST00000412453 271 ntBASIC18.99■□□□□ 0.63
NLGN3Q9NZ94 CCR12P-201ENST00000446203 998 ntBASIC18.99■□□□□ 0.63
NLGN3Q9NZ94 AC008040.2-201ENST00000461049 708 ntBASIC18.99■□□□□ 0.63
NLGN3Q9NZ94 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
NLGN3Q9NZ94 AC116562.4-202ENST00000641738 218 ntBASIC18.99■□□□□ 0.63
NLGN3Q9NZ94 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.99■□□□□ 0.63
NLGN3Q9NZ94 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
NLGN3Q9NZ94 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NLGN3Q9NZ94 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NLGN3Q9NZ94 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.99■□□□□ 0.63
NLGN3Q9NZ94 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.99■□□□□ 0.63
NLGN3Q9NZ94 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NLGN3Q9NZ94 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NLGN3Q9NZ94 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NLGN3Q9NZ94 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
NLGN3Q9NZ94 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NLGN3Q9NZ94 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.98■□□□□ 0.63
NLGN3Q9NZ94 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NLGN3Q9NZ94 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NLGN3Q9NZ94 BX119927.1-201ENST00000636596 1552 ntBASIC18.98■□□□□ 0.63
NLGN3Q9NZ94 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NLGN3Q9NZ94 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
NLGN3Q9NZ94 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NLGN3Q9NZ94 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.98■□□□□ 0.63
NLGN3Q9NZ94 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
NLGN3Q9NZ94 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.98■□□□□ 0.63
NLGN3Q9NZ94 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.98■□□□□ 0.63
NLGN3Q9NZ94 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms