Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
MKS1Q9NXB0 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
MKS1Q9NXB0 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MKS1Q9NXB0 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
MKS1Q9NXB0 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
MKS1Q9NXB0 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MKS1Q9NXB0 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MKS1Q9NXB0 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MKS1Q9NXB0 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
MKS1Q9NXB0 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.18■□□□□ 0.66
MKS1Q9NXB0 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
MKS1Q9NXB0 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.18■□□□□ 0.66
MKS1Q9NXB0 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.18■□□□□ 0.66
MKS1Q9NXB0 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MKS1Q9NXB0 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MKS1Q9NXB0 AC093787.1-201ENST00000450396 207 ntBASIC19.18■□□□□ 0.66
MKS1Q9NXB0 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.18■□□□□ 0.66
MKS1Q9NXB0 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.18■□□□□ 0.66
MKS1Q9NXB0 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MKS1Q9NXB0 BICD1-207ENST00000551848 1962 ntBASIC19.18■□□□□ 0.66
MKS1Q9NXB0 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.18■□□□□ 0.66
MKS1Q9NXB0 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
MKS1Q9NXB0 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
MKS1Q9NXB0 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
MKS1Q9NXB0 IRX1P1-201ENST00000438849 1838 ntBASIC19.18■□□□□ 0.66
MKS1Q9NXB0 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.18■□□□□ 0.66
MKS1Q9NXB0 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
MKS1Q9NXB0 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.18■□□□□ 0.66
MKS1Q9NXB0 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.17■□□□□ 0.66
MKS1Q9NXB0 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MKS1Q9NXB0 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MKS1Q9NXB0 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MKS1Q9NXB0 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
MKS1Q9NXB0 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
MKS1Q9NXB0 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
MKS1Q9NXB0 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
MKS1Q9NXB0 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MKS1Q9NXB0 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
MKS1Q9NXB0 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
MKS1Q9NXB0 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
MKS1Q9NXB0 AC007322.1-201ENST00000426983 750 ntBASIC19.17■□□□□ 0.66
MKS1Q9NXB0 KRT18P5-201ENST00000436075 1291 ntBASIC19.17■□□□□ 0.66
MKS1Q9NXB0 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MKS1Q9NXB0 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.17■□□□□ 0.66
MKS1Q9NXB0 MIR6821-201ENST00000617625 74 ntBASIC19.17■□□□□ 0.66
MKS1Q9NXB0 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MKS1Q9NXB0 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MKS1Q9NXB0 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
MKS1Q9NXB0 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.17■□□□□ 0.66
MKS1Q9NXB0 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MKS1Q9NXB0 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MKS1Q9NXB0 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MKS1Q9NXB0 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.17■□□□□ 0.66
MKS1Q9NXB0 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MKS1Q9NXB0 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MKS1Q9NXB0 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MKS1Q9NXB0 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.16■□□□□ 0.66
MKS1Q9NXB0 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
MKS1Q9NXB0 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
MKS1Q9NXB0 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MKS1Q9NXB0 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
MKS1Q9NXB0 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MKS1Q9NXB0 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MKS1Q9NXB0 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MKS1Q9NXB0 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MKS1Q9NXB0 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MKS1Q9NXB0 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
MKS1Q9NXB0 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
MKS1Q9NXB0 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
MKS1Q9NXB0 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
MKS1Q9NXB0 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
MKS1Q9NXB0 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.16■□□□□ 0.66
MKS1Q9NXB0 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.16■□□□□ 0.66
MKS1Q9NXB0 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.16■□□□□ 0.66
MKS1Q9NXB0 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.16■□□□□ 0.66
MKS1Q9NXB0 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
MKS1Q9NXB0 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.16■□□□□ 0.66
MKS1Q9NXB0 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
MKS1Q9NXB0 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
MKS1Q9NXB0 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.16■□□□□ 0.66
MKS1Q9NXB0 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MKS1Q9NXB0 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MKS1Q9NXB0 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.16■□□□□ 0.66
MKS1Q9NXB0 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MKS1Q9NXB0 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
MKS1Q9NXB0 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
MKS1Q9NXB0 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
MKS1Q9NXB0 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.15■□□□□ 0.66
MKS1Q9NXB0 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
MKS1Q9NXB0 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
MKS1Q9NXB0 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.15■□□□□ 0.66
MKS1Q9NXB0 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.15■□□□□ 0.66
MKS1Q9NXB0 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.15■□□□□ 0.66
MKS1Q9NXB0 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.15■□□□□ 0.66
MKS1Q9NXB0 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.15■□□□□ 0.66
MKS1Q9NXB0 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.15■□□□□ 0.66
MKS1Q9NXB0 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
MKS1Q9NXB0 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MKS1Q9NXB0 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
MKS1Q9NXB0 AL354751.1-201ENST00000412768 1863 ntBASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms