Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC22.2■■□□□ 1.14
RNF216Q9NWF9 MIR4497-201ENST00000583208 89 ntBASIC22.2■■□□□ 1.14
RNF216Q9NWF9 AL034374.2-201ENST00000605281 548 ntBASIC22.2■■□□□ 1.14
RNF216Q9NWF9 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
RNF216Q9NWF9 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
RNF216Q9NWF9 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
RNF216Q9NWF9 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC22.2■■□□□ 1.14
RNF216Q9NWF9 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC22.2■■□□□ 1.14
RNF216Q9NWF9 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
RNF216Q9NWF9 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC22.2■■□□□ 1.14
RNF216Q9NWF9 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC22.2■■□□□ 1.14
RNF216Q9NWF9 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC22.2■■□□□ 1.14
RNF216Q9NWF9 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC22.2■■□□□ 1.14
RNF216Q9NWF9 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
RNF216Q9NWF9 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
RNF216Q9NWF9 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RNF216Q9NWF9 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC22.19■■□□□ 1.14
RNF216Q9NWF9 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RNF216Q9NWF9 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RNF216Q9NWF9 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
RNF216Q9NWF9 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC22.19■■□□□ 1.14
RNF216Q9NWF9 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC22.19■■□□□ 1.14
RNF216Q9NWF9 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RNF216Q9NWF9 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC22.19■■□□□ 1.14
RNF216Q9NWF9 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RNF216Q9NWF9 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC22.19■■□□□ 1.14
RNF216Q9NWF9 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
RNF216Q9NWF9 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC22.19■■□□□ 1.14
RNF216Q9NWF9 AC005829.2-201ENST00000571422 1056 ntBASIC22.19■■□□□ 1.14
RNF216Q9NWF9 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RNF216Q9NWF9 AC146944.4-201ENST00000602697 718 ntBASIC22.19■■□□□ 1.14
RNF216Q9NWF9 AP001412.1-201ENST00000608405 714 ntBASIC22.19■■□□□ 1.14
RNF216Q9NWF9 AC092574.1-201ENST00000609771 420 ntBASIC22.19■■□□□ 1.14
RNF216Q9NWF9 AL356652.1-201ENST00000615962 565 ntBASIC22.19■■□□□ 1.14
RNF216Q9NWF9 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC22.19■■□□□ 1.14
RNF216Q9NWF9 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC22.19■■□□□ 1.14
RNF216Q9NWF9 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
RNF216Q9NWF9 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC22.19■■□□□ 1.14
RNF216Q9NWF9 ME2-218ENST00000640965 2476 ntTSL 5 BASIC22.19■■□□□ 1.14
RNF216Q9NWF9 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
RNF216Q9NWF9 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RNF216Q9NWF9 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
RNF216Q9NWF9 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RNF216Q9NWF9 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RNF216Q9NWF9 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC22.18■■□□□ 1.14
RNF216Q9NWF9 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC22.18■■□□□ 1.14
RNF216Q9NWF9 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RNF216Q9NWF9 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC22.18■■□□□ 1.14
RNF216Q9NWF9 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RNF216Q9NWF9 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC22.18■■□□□ 1.14
RNF216Q9NWF9 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
RNF216Q9NWF9 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
RNF216Q9NWF9 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RNF216Q9NWF9 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
RNF216Q9NWF9 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RNF216Q9NWF9 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
RNF216Q9NWF9 ISG20-202ENST00000379224 540 ntTSL 3 BASIC22.18■■□□□ 1.14
RNF216Q9NWF9 AL445218.1-202ENST00000427695 845 ntTSL 3 BASIC22.18■■□□□ 1.14
RNF216Q9NWF9 AC005324.2-201ENST00000433051 415 ntTSL 5 BASIC22.18■■□□□ 1.14
RNF216Q9NWF9 AC022395.1-201ENST00000451610 895 ntTSL 2 BASIC22.18■■□□□ 1.14
RNF216Q9NWF9 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
RNF216Q9NWF9 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC22.18■■□□□ 1.14
RNF216Q9NWF9 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RNF216Q9NWF9 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
RNF216Q9NWF9 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RNF216Q9NWF9 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC22.18■■□□□ 1.14
RNF216Q9NWF9 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
RNF216Q9NWF9 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RNF216Q9NWF9 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
RNF216Q9NWF9 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC22.17■■□□□ 1.14
RNF216Q9NWF9 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RNF216Q9NWF9 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC22.17■■□□□ 1.14
RNF216Q9NWF9 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC22.17■■□□□ 1.14
RNF216Q9NWF9 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RNF216Q9NWF9 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC22.17■■□□□ 1.14
RNF216Q9NWF9 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC22.17■■□□□ 1.14
RNF216Q9NWF9 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RNF216Q9NWF9 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
RNF216Q9NWF9 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RNF216Q9NWF9 LARP7P4-201ENST00000481075 878 ntBASIC22.17■■□□□ 1.14
RNF216Q9NWF9 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC22.17■■□□□ 1.14
RNF216Q9NWF9 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC22.17■■□□□ 1.14
RNF216Q9NWF9 AC097487.1-201ENST00000514134 934 ntTSL 3 BASIC22.17■■□□□ 1.14
RNF216Q9NWF9 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RNF216Q9NWF9 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC22.17■■□□□ 1.14
RNF216Q9NWF9 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC22.17■■□□□ 1.14
RNF216Q9NWF9 MIR4760-201ENST00000585040 80 ntBASIC22.17■■□□□ 1.14
RNF216Q9NWF9 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RNF216Q9NWF9 AP005212.1-201ENST00000581547 1997 ntBASIC22.17■■□□□ 1.14
RNF216Q9NWF9 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RNF216Q9NWF9 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RNF216Q9NWF9 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RNF216Q9NWF9 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC22.17■■□□□ 1.14
RNF216Q9NWF9 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RNF216Q9NWF9 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC22.17■■□□□ 1.14
RNF216Q9NWF9 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC22.16■■□□□ 1.14
RNF216Q9NWF9 AL135905.2-201ENST00000584934 1404 ntBASIC22.16■■□□□ 1.14
RNF216Q9NWF9 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC22.16■■□□□ 1.14
RNF216Q9NWF9 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
RNF216Q9NWF9 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms