Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.09■□□□□ 0.49
RLIMQ9NVW2 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RLIMQ9NVW2 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RLIMQ9NVW2 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RLIMQ9NVW2 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RLIMQ9NVW2 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RLIMQ9NVW2 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.08■□□□□ 0.49
RLIMQ9NVW2 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.08■□□□□ 0.49
RLIMQ9NVW2 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RLIMQ9NVW2 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RLIMQ9NVW2 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RLIMQ9NVW2 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
RLIMQ9NVW2 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RLIMQ9NVW2 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RLIMQ9NVW2 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RLIMQ9NVW2 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.08■□□□□ 0.48
RLIMQ9NVW2 AC073210.2-201ENST00000430369 194 ntBASIC18.08■□□□□ 0.48
RLIMQ9NVW2 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.08■□□□□ 0.48
RLIMQ9NVW2 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.08■□□□□ 0.48
RLIMQ9NVW2 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.48
RLIMQ9NVW2 AL109923.1-201ENST00000618799 583 ntBASIC18.08■□□□□ 0.48
RLIMQ9NVW2 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RLIMQ9NVW2 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.08■□□□□ 0.48
RLIMQ9NVW2 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.08■□□□□ 0.48
RLIMQ9NVW2 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RLIMQ9NVW2 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RLIMQ9NVW2 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
RLIMQ9NVW2 TFP1-202ENST00000475455 1573 ntBASIC18.08■□□□□ 0.48
RLIMQ9NVW2 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
RLIMQ9NVW2 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RLIMQ9NVW2 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
RLIMQ9NVW2 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RLIMQ9NVW2 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RLIMQ9NVW2 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
RLIMQ9NVW2 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.07■□□□□ 0.48
RLIMQ9NVW2 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RLIMQ9NVW2 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
RLIMQ9NVW2 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
RLIMQ9NVW2 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RLIMQ9NVW2 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
RLIMQ9NVW2 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RLIMQ9NVW2 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
RLIMQ9NVW2 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.07■□□□□ 0.48
RLIMQ9NVW2 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.07■□□□□ 0.48
RLIMQ9NVW2 AC090192.1-201ENST00000517740 490 ntBASIC18.07■□□□□ 0.48
RLIMQ9NVW2 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.07■□□□□ 0.48
RLIMQ9NVW2 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
RLIMQ9NVW2 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.07■□□□□ 0.48
RLIMQ9NVW2 AC092368.3-202ENST00000574180 1591 ntBASIC18.07■□□□□ 0.48
RLIMQ9NVW2 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RLIMQ9NVW2 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RLIMQ9NVW2 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RLIMQ9NVW2 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
RLIMQ9NVW2 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RLIMQ9NVW2 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
RLIMQ9NVW2 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.06■□□□□ 0.48
RLIMQ9NVW2 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RLIMQ9NVW2 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RLIMQ9NVW2 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.06■□□□□ 0.48
RLIMQ9NVW2 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RLIMQ9NVW2 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
RLIMQ9NVW2 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RLIMQ9NVW2 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.06■□□□□ 0.48
RLIMQ9NVW2 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.06■□□□□ 0.48
RLIMQ9NVW2 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
RLIMQ9NVW2 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.06■□□□□ 0.48
RLIMQ9NVW2 AC083880.1-201ENST00000608266 535 ntBASIC18.06■□□□□ 0.48
RLIMQ9NVW2 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RLIMQ9NVW2 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.06■□□□□ 0.48
RLIMQ9NVW2 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
RLIMQ9NVW2 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RLIMQ9NVW2 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
RLIMQ9NVW2 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RLIMQ9NVW2 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
RLIMQ9NVW2 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
RLIMQ9NVW2 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.06■□□□□ 0.48
RLIMQ9NVW2 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RLIMQ9NVW2 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
RLIMQ9NVW2 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
RLIMQ9NVW2 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RLIMQ9NVW2 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RLIMQ9NVW2 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RLIMQ9NVW2 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.05■□□□□ 0.48
RLIMQ9NVW2 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.05■□□□□ 0.48
RLIMQ9NVW2 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.05■□□□□ 0.48
RLIMQ9NVW2 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
RLIMQ9NVW2 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.05■□□□□ 0.48
RLIMQ9NVW2 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.05■□□□□ 0.48
RLIMQ9NVW2 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
RLIMQ9NVW2 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.05■□□□□ 0.48
RLIMQ9NVW2 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.05■□□□□ 0.48
RLIMQ9NVW2 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.05■□□□□ 0.48
RLIMQ9NVW2 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RLIMQ9NVW2 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RLIMQ9NVW2 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
RLIMQ9NVW2 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.05■□□□□ 0.48
RLIMQ9NVW2 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RLIMQ9NVW2 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
RLIMQ9NVW2 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
RLIMQ9NVW2 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms