Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
VTA1Q9NP79 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.76■■□□□ 1.07
VTA1Q9NP79 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
VTA1Q9NP79 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
VTA1Q9NP79 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
VTA1Q9NP79 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
VTA1Q9NP79 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.76■■□□□ 1.07
VTA1Q9NP79 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
VTA1Q9NP79 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC21.76■■□□□ 1.07
VTA1Q9NP79 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC21.76■■□□□ 1.07
VTA1Q9NP79 AC092647.4-201ENST00000457211 535 ntBASIC21.76■■□□□ 1.07
VTA1Q9NP79 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC21.76■■□□□ 1.07
VTA1Q9NP79 PRSS44-201ENST00000515154 1146 ntBASIC21.76■■□□□ 1.07
VTA1Q9NP79 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC21.76■■□□□ 1.07
VTA1Q9NP79 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC21.76■■□□□ 1.07
VTA1Q9NP79 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC21.76■■□□□ 1.07
VTA1Q9NP79 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
VTA1Q9NP79 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC21.76■■□□□ 1.07
VTA1Q9NP79 AC011558.1-201ENST00000623459 338 ntBASIC21.76■■□□□ 1.07
VTA1Q9NP79 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
VTA1Q9NP79 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
VTA1Q9NP79 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
VTA1Q9NP79 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
VTA1Q9NP79 ANKRD18DP-204ENST00000455355 1975 ntBASIC21.76■■□□□ 1.07
VTA1Q9NP79 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
VTA1Q9NP79 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC21.75■■□□□ 1.07
VTA1Q9NP79 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
VTA1Q9NP79 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
VTA1Q9NP79 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
VTA1Q9NP79 ANKRD20A18P-201ENST00000359341 492 ntBASIC21.75■■□□□ 1.07
VTA1Q9NP79 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
VTA1Q9NP79 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
VTA1Q9NP79 ISCU-203ENST00000431221 799 ntTSL 2 BASIC21.75■■□□□ 1.07
VTA1Q9NP79 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC21.75■■□□□ 1.07
VTA1Q9NP79 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC21.75■■□□□ 1.07
VTA1Q9NP79 AP003041.3-201ENST00000527151 707 ntBASIC21.75■■□□□ 1.07
VTA1Q9NP79 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC21.75■■□□□ 1.07
VTA1Q9NP79 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
VTA1Q9NP79 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
VTA1Q9NP79 AC091076.1-201ENST00000610741 619 ntBASIC21.75■■□□□ 1.07
VTA1Q9NP79 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC21.75■■□□□ 1.07
VTA1Q9NP79 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
VTA1Q9NP79 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
VTA1Q9NP79 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC21.75■■□□□ 1.07
VTA1Q9NP79 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
VTA1Q9NP79 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.75■■□□□ 1.07
VTA1Q9NP79 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC21.75■■□□□ 1.07
VTA1Q9NP79 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
VTA1Q9NP79 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC21.75■■□□□ 1.07
VTA1Q9NP79 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
VTA1Q9NP79 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.75■■□□□ 1.07
VTA1Q9NP79 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
VTA1Q9NP79 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
VTA1Q9NP79 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
VTA1Q9NP79 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
VTA1Q9NP79 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
VTA1Q9NP79 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC21.74■■□□□ 1.07
VTA1Q9NP79 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC21.74■■□□□ 1.07
VTA1Q9NP79 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
VTA1Q9NP79 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
VTA1Q9NP79 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
VTA1Q9NP79 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
VTA1Q9NP79 AL031133.1-201ENST00000406807 723 ntBASIC21.74■■□□□ 1.07
VTA1Q9NP79 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC21.74■■□□□ 1.07
VTA1Q9NP79 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC21.74■■□□□ 1.07
VTA1Q9NP79 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
VTA1Q9NP79 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
VTA1Q9NP79 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC21.74■■□□□ 1.07
VTA1Q9NP79 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC21.74■■□□□ 1.07
VTA1Q9NP79 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC21.74■■□□□ 1.07
VTA1Q9NP79 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
VTA1Q9NP79 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC21.74■■□□□ 1.07
VTA1Q9NP79 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
VTA1Q9NP79 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC21.74■■□□□ 1.07
VTA1Q9NP79 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
VTA1Q9NP79 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
VTA1Q9NP79 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC21.74■■□□□ 1.07
VTA1Q9NP79 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC21.74■■□□□ 1.07
VTA1Q9NP79 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC21.73■■□□□ 1.07
VTA1Q9NP79 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
VTA1Q9NP79 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
VTA1Q9NP79 GABARAPL3-202ENST00000624044 1851 ntBASIC21.73■■□□□ 1.07
VTA1Q9NP79 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
VTA1Q9NP79 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
VTA1Q9NP79 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
VTA1Q9NP79 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.73■■□□□ 1.07
VTA1Q9NP79 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
VTA1Q9NP79 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
VTA1Q9NP79 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
VTA1Q9NP79 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
VTA1Q9NP79 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
VTA1Q9NP79 CLN6-204ENST00000564752 900 ntTSL 3 BASIC21.73■■□□□ 1.07
VTA1Q9NP79 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC21.73■■□□□ 1.07
VTA1Q9NP79 AL358472.4-201ENST00000633140 710 ntBASIC21.73■■□□□ 1.07
VTA1Q9NP79 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
VTA1Q9NP79 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.73■■□□□ 1.07
VTA1Q9NP79 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
VTA1Q9NP79 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
VTA1Q9NP79 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
VTA1Q9NP79 KRT8P11-201ENST00000409686 1436 ntBASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms