Protein–RNA interactions for Protein: Q9NP61

ARFGAP3, ADP-ribosylation factor GTPase-activating protein 3, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP3Q9NP61 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ARFGAP3Q9NP61 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ARFGAP3Q9NP61 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ARFGAP3Q9NP61 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
ARFGAP3Q9NP61 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
ARFGAP3Q9NP61 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
ARFGAP3Q9NP61 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.72■□□□□ 0.91
ARFGAP3Q9NP61 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC20.72■□□□□ 0.91
ARFGAP3Q9NP61 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.72■□□□□ 0.91
ARFGAP3Q9NP61 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
ARFGAP3Q9NP61 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ARFGAP3Q9NP61 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ARFGAP3Q9NP61 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ARFGAP3Q9NP61 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.72■□□□□ 0.91
ARFGAP3Q9NP61 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ARFGAP3Q9NP61 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.72■□□□□ 0.91
ARFGAP3Q9NP61 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.72■□□□□ 0.91
ARFGAP3Q9NP61 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ARFGAP3Q9NP61 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ARFGAP3Q9NP61 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
ARFGAP3Q9NP61 AC010536.3-201ENST00000620306 533 ntBASIC20.72■□□□□ 0.91
ARFGAP3Q9NP61 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ARFGAP3Q9NP61 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ARFGAP3Q9NP61 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ARFGAP3Q9NP61 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC20.72■□□□□ 0.91
ARFGAP3Q9NP61 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
ARFGAP3Q9NP61 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ARFGAP3Q9NP61 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ARFGAP3Q9NP61 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ARFGAP3Q9NP61 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ARFGAP3Q9NP61 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ARFGAP3Q9NP61 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ARFGAP3Q9NP61 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ARFGAP3Q9NP61 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ARFGAP3Q9NP61 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.71■□□□□ 0.91
ARFGAP3Q9NP61 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ARFGAP3Q9NP61 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
ARFGAP3Q9NP61 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ARFGAP3Q9NP61 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
ARFGAP3Q9NP61 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.71■□□□□ 0.91
ARFGAP3Q9NP61 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.71■□□□□ 0.91
ARFGAP3Q9NP61 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.71■□□□□ 0.91
ARFGAP3Q9NP61 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.71■□□□□ 0.91
ARFGAP3Q9NP61 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ARFGAP3Q9NP61 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.71■□□□□ 0.91
ARFGAP3Q9NP61 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ARFGAP3Q9NP61 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ARFGAP3Q9NP61 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ARFGAP3Q9NP61 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ARFGAP3Q9NP61 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ARFGAP3Q9NP61 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ARFGAP3Q9NP61 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ARFGAP3Q9NP61 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
ARFGAP3Q9NP61 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ARFGAP3Q9NP61 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.71■□□□□ 0.91
ARFGAP3Q9NP61 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ARFGAP3Q9NP61 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
ARFGAP3Q9NP61 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ARFGAP3Q9NP61 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
ARFGAP3Q9NP61 KRT16P2-201ENST00000414673 1423 ntBASIC20.7■□□□□ 0.9
ARFGAP3Q9NP61 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.7■□□□□ 0.9
ARFGAP3Q9NP61 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.7■□□□□ 0.9
ARFGAP3Q9NP61 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC20.7■□□□□ 0.9
ARFGAP3Q9NP61 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.7■□□□□ 0.9
ARFGAP3Q9NP61 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
ARFGAP3Q9NP61 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
ARFGAP3Q9NP61 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ARFGAP3Q9NP61 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ARFGAP3Q9NP61 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC20.7■□□□□ 0.9
ARFGAP3Q9NP61 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.7■□□□□ 0.9
ARFGAP3Q9NP61 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
ARFGAP3Q9NP61 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.7■□□□□ 0.9
ARFGAP3Q9NP61 AC009237.14-201ENST00000609975 1594 ntBASIC20.7■□□□□ 0.9
ARFGAP3Q9NP61 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC20.7■□□□□ 0.9
ARFGAP3Q9NP61 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ARFGAP3Q9NP61 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ARFGAP3Q9NP61 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC20.7■□□□□ 0.9
ARFGAP3Q9NP61 NOC2LP2-201ENST00000407594 1944 ntBASIC20.7■□□□□ 0.9
ARFGAP3Q9NP61 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.7■□□□□ 0.9
ARFGAP3Q9NP61 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.7■□□□□ 0.9
ARFGAP3Q9NP61 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
ARFGAP3Q9NP61 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ARFGAP3Q9NP61 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ARFGAP3Q9NP61 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ARFGAP3Q9NP61 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ARFGAP3Q9NP61 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC20.7■□□□□ 0.9
ARFGAP3Q9NP61 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
ARFGAP3Q9NP61 AC090164.3-201ENST00000610780 2143 ntBASIC20.69■□□□□ 0.9
ARFGAP3Q9NP61 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ARFGAP3Q9NP61 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
ARFGAP3Q9NP61 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ARFGAP3Q9NP61 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ARFGAP3Q9NP61 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ARFGAP3Q9NP61 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
ARFGAP3Q9NP61 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
ARFGAP3Q9NP61 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC20.69■□□□□ 0.9
ARFGAP3Q9NP61 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.69■□□□□ 0.9
ARFGAP3Q9NP61 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.69■□□□□ 0.9
ARFGAP3Q9NP61 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
ARFGAP3Q9NP61 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms