Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRRC40Q9H9A6 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRRC40Q9H9A6 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRRC40Q9H9A6 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRRC40Q9H9A6 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
LRRC40Q9H9A6 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRRC40Q9H9A6 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.71■□□□□ 0.75
LRRC40Q9H9A6 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LRRC40Q9H9A6 RNA5SP413-201ENST00000516373 109 ntBASIC19.71■□□□□ 0.75
LRRC40Q9H9A6 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LRRC40Q9H9A6 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.71■□□□□ 0.75
LRRC40Q9H9A6 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LRRC40Q9H9A6 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LRRC40Q9H9A6 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRRC40Q9H9A6 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.71■□□□□ 0.75
LRRC40Q9H9A6 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.71■□□□□ 0.75
LRRC40Q9H9A6 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRRC40Q9H9A6 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRRC40Q9H9A6 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRRC40Q9H9A6 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRRC40Q9H9A6 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRRC40Q9H9A6 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRRC40Q9H9A6 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LRRC40Q9H9A6 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRRC40Q9H9A6 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.7■□□□□ 0.74
LRRC40Q9H9A6 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
LRRC40Q9H9A6 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LRRC40Q9H9A6 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRRC40Q9H9A6 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRRC40Q9H9A6 TUBB8P6-201ENST00000436895 1288 ntBASIC19.7■□□□□ 0.74
LRRC40Q9H9A6 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.7■□□□□ 0.74
LRRC40Q9H9A6 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.7■□□□□ 0.74
LRRC40Q9H9A6 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.7■□□□□ 0.74
LRRC40Q9H9A6 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.7■□□□□ 0.74
LRRC40Q9H9A6 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LRRC40Q9H9A6 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.7■□□□□ 0.74
LRRC40Q9H9A6 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LRRC40Q9H9A6 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LRRC40Q9H9A6 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRRC40Q9H9A6 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRRC40Q9H9A6 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRRC40Q9H9A6 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LRRC40Q9H9A6 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.7■□□□□ 0.74
LRRC40Q9H9A6 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRRC40Q9H9A6 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRRC40Q9H9A6 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LRRC40Q9H9A6 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.7■□□□□ 0.74
LRRC40Q9H9A6 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRRC40Q9H9A6 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.7■□□□□ 0.74
LRRC40Q9H9A6 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.69■□□□□ 0.74
LRRC40Q9H9A6 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRRC40Q9H9A6 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRRC40Q9H9A6 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRRC40Q9H9A6 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRRC40Q9H9A6 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.69■□□□□ 0.74
LRRC40Q9H9A6 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.69■□□□□ 0.74
LRRC40Q9H9A6 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.69■□□□□ 0.74
LRRC40Q9H9A6 AP003097.1-201ENST00000530657 1135 ntBASIC19.69■□□□□ 0.74
LRRC40Q9H9A6 PRKY-204ENST00000533551 1019 ntBASIC19.69■□□□□ 0.74
LRRC40Q9H9A6 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRRC40Q9H9A6 AC008403.3-201ENST00000598924 454 ntBASIC19.69■□□□□ 0.74
LRRC40Q9H9A6 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.69■□□□□ 0.74
LRRC40Q9H9A6 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.69■□□□□ 0.74
LRRC40Q9H9A6 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
LRRC40Q9H9A6 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRRC40Q9H9A6 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRRC40Q9H9A6 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRRC40Q9H9A6 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.69■□□□□ 0.74
LRRC40Q9H9A6 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.69■□□□□ 0.74
LRRC40Q9H9A6 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.69■□□□□ 0.74
LRRC40Q9H9A6 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LRRC40Q9H9A6 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRRC40Q9H9A6 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
LRRC40Q9H9A6 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
LRRC40Q9H9A6 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRRC40Q9H9A6 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
LRRC40Q9H9A6 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LRRC40Q9H9A6 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
LRRC40Q9H9A6 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
LRRC40Q9H9A6 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.68■□□□□ 0.74
LRRC40Q9H9A6 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRRC40Q9H9A6 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRRC40Q9H9A6 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
LRRC40Q9H9A6 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRRC40Q9H9A6 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRRC40Q9H9A6 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRRC40Q9H9A6 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LRRC40Q9H9A6 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.68■□□□□ 0.74
LRRC40Q9H9A6 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.68■□□□□ 0.74
LRRC40Q9H9A6 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.68■□□□□ 0.74
LRRC40Q9H9A6 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRRC40Q9H9A6 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.68■□□□□ 0.74
LRRC40Q9H9A6 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
LRRC40Q9H9A6 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRRC40Q9H9A6 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
LRRC40Q9H9A6 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.68■□□□□ 0.74
LRRC40Q9H9A6 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRRC40Q9H9A6 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.68■□□□□ 0.74
LRRC40Q9H9A6 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
LRRC40Q9H9A6 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms