Protein–RNA interactions for Protein: Q9H6A9

PCNX3, Pecanex-like protein 3, humanhuman

Predictions only

Length 2,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3Q9H6A9 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.61■□□□□ 0.41
PCNX3Q9H6A9 HLA-A-209ENST00000638375 975 ntBASIC17.61■□□□□ 0.41
PCNX3Q9H6A9 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
PCNX3Q9H6A9 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCNX3Q9H6A9 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCNX3Q9H6A9 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCNX3Q9H6A9 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCNX3Q9H6A9 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCNX3Q9H6A9 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCNX3Q9H6A9 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCNX3Q9H6A9 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCNX3Q9H6A9 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.61■□□□□ 0.41
PCNX3Q9H6A9 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCNX3Q9H6A9 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.61■□□□□ 0.41
PCNX3Q9H6A9 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCNX3Q9H6A9 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCNX3Q9H6A9 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.6■□□□□ 0.41
PCNX3Q9H6A9 RPS2P4-201ENST00000476944 856 ntBASIC17.6■□□□□ 0.41
PCNX3Q9H6A9 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.6■□□□□ 0.41
PCNX3Q9H6A9 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.6■□□□□ 0.41
PCNX3Q9H6A9 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCNX3Q9H6A9 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
PCNX3Q9H6A9 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCNX3Q9H6A9 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
PCNX3Q9H6A9 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCNX3Q9H6A9 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCNX3Q9H6A9 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
PCNX3Q9H6A9 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.6■□□□□ 0.41
PCNX3Q9H6A9 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.6■□□□□ 0.41
PCNX3Q9H6A9 MIR4497-201ENST00000583208 89 ntBASIC17.6■□□□□ 0.41
PCNX3Q9H6A9 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.6■□□□□ 0.41
PCNX3Q9H6A9 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.6■□□□□ 0.41
PCNX3Q9H6A9 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.6■□□□□ 0.41
PCNX3Q9H6A9 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.6■□□□□ 0.41
PCNX3Q9H6A9 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCNX3Q9H6A9 AL032819.2-201ENST00000624543 2162 ntBASIC17.59■□□□□ 0.41
PCNX3Q9H6A9 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCNX3Q9H6A9 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCNX3Q9H6A9 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.59■□□□□ 0.41
PCNX3Q9H6A9 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
PCNX3Q9H6A9 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCNX3Q9H6A9 KRT8P9-201ENST00000558927 1449 ntBASIC17.59■□□□□ 0.41
PCNX3Q9H6A9 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCNX3Q9H6A9 KRT8P41-201ENST00000533985 1514 ntBASIC17.59■□□□□ 0.41
PCNX3Q9H6A9 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
PCNX3Q9H6A9 TSPY7P-201ENST00000431358 1114 ntBASIC17.59■□□□□ 0.41
PCNX3Q9H6A9 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCNX3Q9H6A9 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCNX3Q9H6A9 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.59■□□□□ 0.41
PCNX3Q9H6A9 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.59■□□□□ 0.41
PCNX3Q9H6A9 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.59■□□□□ 0.41
PCNX3Q9H6A9 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCNX3Q9H6A9 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.59■□□□□ 0.41
PCNX3Q9H6A9 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCNX3Q9H6A9 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.59■□□□□ 0.41
PCNX3Q9H6A9 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.59■□□□□ 0.41
PCNX3Q9H6A9 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCNX3Q9H6A9 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
PCNX3Q9H6A9 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.59■□□□□ 0.41
PCNX3Q9H6A9 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCNX3Q9H6A9 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.59■□□□□ 0.41
PCNX3Q9H6A9 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCNX3Q9H6A9 AL596275.1-201ENST00000423464 877 ntBASIC17.59■□□□□ 0.41
PCNX3Q9H6A9 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.59■□□□□ 0.41
PCNX3Q9H6A9 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.59■□□□□ 0.41
PCNX3Q9H6A9 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCNX3Q9H6A9 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.59■□□□□ 0.41
PCNX3Q9H6A9 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.59■□□□□ 0.41
PCNX3Q9H6A9 AL031985.4-201ENST00000642138 673 ntBASIC17.59■□□□□ 0.41
PCNX3Q9H6A9 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
PCNX3Q9H6A9 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCNX3Q9H6A9 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCNX3Q9H6A9 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.58■□□□□ 0.41
PCNX3Q9H6A9 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCNX3Q9H6A9 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.58■□□□□ 0.41
PCNX3Q9H6A9 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.58■□□□□ 0.41
PCNX3Q9H6A9 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
PCNX3Q9H6A9 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.58■□□□□ 0.4
PCNX3Q9H6A9 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCNX3Q9H6A9 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PCNX3Q9H6A9 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.58■□□□□ 0.4
PCNX3Q9H6A9 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
PCNX3Q9H6A9 AL390955.1-201ENST00000428694 934 ntBASIC17.58■□□□□ 0.4
PCNX3Q9H6A9 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.58■□□□□ 0.4
PCNX3Q9H6A9 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.58■□□□□ 0.4
PCNX3Q9H6A9 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.58■□□□□ 0.4
PCNX3Q9H6A9 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
PCNX3Q9H6A9 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
PCNX3Q9H6A9 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.58■□□□□ 0.4
PCNX3Q9H6A9 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PCNX3Q9H6A9 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PCNX3Q9H6A9 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.58■□□□□ 0.4
PCNX3Q9H6A9 AL135905.2-201ENST00000584934 1404 ntBASIC17.58■□□□□ 0.4
PCNX3Q9H6A9 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCNX3Q9H6A9 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
PCNX3Q9H6A9 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
PCNX3Q9H6A9 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
PCNX3Q9H6A9 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCNX3Q9H6A9 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PCNX3Q9H6A9 Z85996.1-201ENST00000494644 937 ntBASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms