Protein–RNA interactions for Protein: Q9H3M9

ATXN3L, Ataxin-3-like protein, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3LQ9H3M9 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ATXN3LQ9H3M9 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
ATXN3LQ9H3M9 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.41■□□□□ 0.86
ATXN3LQ9H3M9 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
ATXN3LQ9H3M9 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ATXN3LQ9H3M9 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ATXN3LQ9H3M9 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ATXN3LQ9H3M9 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ATXN3LQ9H3M9 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.41■□□□□ 0.86
ATXN3LQ9H3M9 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.41■□□□□ 0.86
ATXN3LQ9H3M9 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ATXN3LQ9H3M9 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.41■□□□□ 0.86
ATXN3LQ9H3M9 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.4■□□□□ 0.86
ATXN3LQ9H3M9 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATXN3LQ9H3M9 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATXN3LQ9H3M9 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ATXN3LQ9H3M9 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
ATXN3LQ9H3M9 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
ATXN3LQ9H3M9 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC20.4■□□□□ 0.86
ATXN3LQ9H3M9 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATXN3LQ9H3M9 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
ATXN3LQ9H3M9 AL049597.2-201ENST00000565575 961 ntBASIC20.4■□□□□ 0.86
ATXN3LQ9H3M9 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
ATXN3LQ9H3M9 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATXN3LQ9H3M9 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.4■□□□□ 0.86
ATXN3LQ9H3M9 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.4■□□□□ 0.86
ATXN3LQ9H3M9 AC130371.2-201ENST00000619443 611 ntBASIC20.4■□□□□ 0.86
ATXN3LQ9H3M9 CLN6-221ENST00000637494 765 ntTSL 5 BASIC20.4■□□□□ 0.86
ATXN3LQ9H3M9 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATXN3LQ9H3M9 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.39■□□□□ 0.86
ATXN3LQ9H3M9 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.39■□□□□ 0.86
ATXN3LQ9H3M9 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
ATXN3LQ9H3M9 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.39■□□□□ 0.85
ATXN3LQ9H3M9 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.39■□□□□ 0.85
ATXN3LQ9H3M9 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC20.39■□□□□ 0.85
ATXN3LQ9H3M9 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATXN3LQ9H3M9 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC20.39■□□□□ 0.85
ATXN3LQ9H3M9 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ATXN3LQ9H3M9 SLC25A3P1-201ENST00000443844 931 ntBASIC20.39■□□□□ 0.85
ATXN3LQ9H3M9 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ATXN3LQ9H3M9 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.39■□□□□ 0.85
ATXN3LQ9H3M9 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.39■□□□□ 0.85
ATXN3LQ9H3M9 SLC25A1P4-201ENST00000567977 778 ntBASIC20.39■□□□□ 0.85
ATXN3LQ9H3M9 AC011298.2-201ENST00000617989 482 ntBASIC20.39■□□□□ 0.85
ATXN3LQ9H3M9 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATXN3LQ9H3M9 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.39■□□□□ 0.85
ATXN3LQ9H3M9 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATXN3LQ9H3M9 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.39■□□□□ 0.85
ATXN3LQ9H3M9 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATXN3LQ9H3M9 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
ATXN3LQ9H3M9 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATXN3LQ9H3M9 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
ATXN3LQ9H3M9 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATXN3LQ9H3M9 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATXN3LQ9H3M9 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.38■□□□□ 0.85
ATXN3LQ9H3M9 RCC2P6-201ENST00000526625 1557 ntBASIC20.38■□□□□ 0.85
ATXN3LQ9H3M9 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATXN3LQ9H3M9 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATXN3LQ9H3M9 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.38■□□□□ 0.85
ATXN3LQ9H3M9 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATXN3LQ9H3M9 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ATXN3LQ9H3M9 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATXN3LQ9H3M9 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATXN3LQ9H3M9 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
ATXN3LQ9H3M9 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATXN3LQ9H3M9 TERF1P1-201ENST00000311003 1181 ntBASIC20.38■□□□□ 0.85
ATXN3LQ9H3M9 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATXN3LQ9H3M9 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC20.38■□□□□ 0.85
ATXN3LQ9H3M9 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
ATXN3LQ9H3M9 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
ATXN3LQ9H3M9 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
ATXN3LQ9H3M9 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.38■□□□□ 0.85
ATXN3LQ9H3M9 AL445228.2-201ENST00000605589 952 ntBASIC20.38■□□□□ 0.85
ATXN3LQ9H3M9 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.38■□□□□ 0.85
ATXN3LQ9H3M9 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
ATXN3LQ9H3M9 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ATXN3LQ9H3M9 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATXN3LQ9H3M9 SLC25A24-204ENST00000569674 2357 ntBASIC20.38■□□□□ 0.85
ATXN3LQ9H3M9 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.38■□□□□ 0.85
ATXN3LQ9H3M9 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATXN3LQ9H3M9 AP001271.2-201ENST00000624018 1556 ntBASIC20.38■□□□□ 0.85
ATXN3LQ9H3M9 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
ATXN3LQ9H3M9 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATXN3LQ9H3M9 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.37■□□□□ 0.85
ATXN3LQ9H3M9 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ATXN3LQ9H3M9 KRT8P8-201ENST00000434750 1448 ntBASIC20.37■□□□□ 0.85
ATXN3LQ9H3M9 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATXN3LQ9H3M9 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATXN3LQ9H3M9 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.37■□□□□ 0.85
ATXN3LQ9H3M9 PRR31-201ENST00000371629 978 ntTSL 2 BASIC20.37■□□□□ 0.85
ATXN3LQ9H3M9 AC004951.3-201ENST00000418645 1148 ntBASIC20.37■□□□□ 0.85
ATXN3LQ9H3M9 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.37■□□□□ 0.85
ATXN3LQ9H3M9 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATXN3LQ9H3M9 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC20.37■□□□□ 0.85
ATXN3LQ9H3M9 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
ATXN3LQ9H3M9 AP000692.2-201ENST00000608391 879 ntBASIC20.37■□□□□ 0.85
ATXN3LQ9H3M9 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATXN3LQ9H3M9 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ATXN3LQ9H3M9 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATXN3LQ9H3M9 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms