Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
PCDH11XQ9BZA7 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC25.27■■□□□ 1.64
PCDH11XQ9BZA7 Telomerase-vert.1-201ENST00000363312 438 ntBASIC25.27■■□□□ 1.64
PCDH11XQ9BZA7 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
PCDH11XQ9BZA7 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC25.27■■□□□ 1.64
PCDH11XQ9BZA7 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC25.27■■□□□ 1.64
PCDH11XQ9BZA7 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC25.27■■□□□ 1.64
PCDH11XQ9BZA7 NEK4P2-201ENST00000580004 1012 ntBASIC25.27■■□□□ 1.64
PCDH11XQ9BZA7 NT5C-210ENST00000582160 860 ntTSL 2 BASIC25.27■■□□□ 1.64
PCDH11XQ9BZA7 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC25.27■■□□□ 1.64
PCDH11XQ9BZA7 AC083849.1-201ENST00000615227 514 ntBASIC25.27■■□□□ 1.64
PCDH11XQ9BZA7 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
PCDH11XQ9BZA7 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
PCDH11XQ9BZA7 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC25.26■■□□□ 1.64
PCDH11XQ9BZA7 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC25.26■■□□□ 1.63
PCDH11XQ9BZA7 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PCDH11XQ9BZA7 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
PCDH11XQ9BZA7 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC25.26■■□□□ 1.63
PCDH11XQ9BZA7 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC25.26■■□□□ 1.63
PCDH11XQ9BZA7 SNX5-210ENST00000481323 562 ntTSL 3 BASIC25.26■■□□□ 1.63
PCDH11XQ9BZA7 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC25.26■■□□□ 1.63
PCDH11XQ9BZA7 AC069148.1-201ENST00000608741 768 ntBASIC25.26■■□□□ 1.63
PCDH11XQ9BZA7 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PCDH11XQ9BZA7 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC25.26■■□□□ 1.63
PCDH11XQ9BZA7 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
PCDH11XQ9BZA7 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
PCDH11XQ9BZA7 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC25.25■■□□□ 1.63
PCDH11XQ9BZA7 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC25.25■■□□□ 1.63
PCDH11XQ9BZA7 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
PCDH11XQ9BZA7 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
PCDH11XQ9BZA7 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
PCDH11XQ9BZA7 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
PCDH11XQ9BZA7 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC25.25■■□□□ 1.63
PCDH11XQ9BZA7 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC25.25■■□□□ 1.63
PCDH11XQ9BZA7 VENTXP5-201ENST00000523979 775 ntBASIC25.25■■□□□ 1.63
PCDH11XQ9BZA7 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC25.25■■□□□ 1.63
PCDH11XQ9BZA7 AL136038.3-201ENST00000561909 1096 ntBASIC25.25■■□□□ 1.63
PCDH11XQ9BZA7 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC25.25■■□□□ 1.63
PCDH11XQ9BZA7 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC25.25■■□□□ 1.63
PCDH11XQ9BZA7 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC25.25■■□□□ 1.63
PCDH11XQ9BZA7 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
PCDH11XQ9BZA7 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC25.24■■□□□ 1.63
PCDH11XQ9BZA7 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC25.24■■□□□ 1.63
PCDH11XQ9BZA7 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
PCDH11XQ9BZA7 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
PCDH11XQ9BZA7 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC25.24■■□□□ 1.63
PCDH11XQ9BZA7 HCG4P8-203ENST00000443049 980 ntBASIC25.24■■□□□ 1.63
PCDH11XQ9BZA7 AC112907.2-201ENST00000448639 330 ntBASIC25.24■■□□□ 1.63
PCDH11XQ9BZA7 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC25.24■■□□□ 1.63
PCDH11XQ9BZA7 PTK2-216ENST00000519881 863 ntTSL 3 BASIC25.24■■□□□ 1.63
PCDH11XQ9BZA7 CD81-212ENST00000526072 1172 ntTSL 5 BASIC25.24■■□□□ 1.63
PCDH11XQ9BZA7 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC25.24■■□□□ 1.63
PCDH11XQ9BZA7 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
PCDH11XQ9BZA7 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
PCDH11XQ9BZA7 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC25.23■■□□□ 1.63
PCDH11XQ9BZA7 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
PCDH11XQ9BZA7 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
PCDH11XQ9BZA7 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC25.23■■□□□ 1.63
PCDH11XQ9BZA7 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC25.23■■□□□ 1.63
PCDH11XQ9BZA7 AC009237.14-201ENST00000609975 1594 ntBASIC25.23■■□□□ 1.63
PCDH11XQ9BZA7 IPPK-202ENST00000375522 882 ntTSL 3 BASIC25.23■■□□□ 1.63
PCDH11XQ9BZA7 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
PCDH11XQ9BZA7 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
PCDH11XQ9BZA7 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC25.23■■□□□ 1.63
PCDH11XQ9BZA7 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC25.23■■□□□ 1.63
PCDH11XQ9BZA7 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC25.23■■□□□ 1.63
PCDH11XQ9BZA7 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC25.23■■□□□ 1.63
PCDH11XQ9BZA7 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
PCDH11XQ9BZA7 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC25.23■■□□□ 1.63
PCDH11XQ9BZA7 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC25.23■■□□□ 1.63
PCDH11XQ9BZA7 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PCDH11XQ9BZA7 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC25.22■■□□□ 1.63
PCDH11XQ9BZA7 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PCDH11XQ9BZA7 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC25.22■■□□□ 1.63
PCDH11XQ9BZA7 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC25.22■■□□□ 1.63
PCDH11XQ9BZA7 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC25.22■■□□□ 1.63
PCDH11XQ9BZA7 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PCDH11XQ9BZA7 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC25.22■■□□□ 1.63
PCDH11XQ9BZA7 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PCDH11XQ9BZA7 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PCDH11XQ9BZA7 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC25.22■■□□□ 1.63
PCDH11XQ9BZA7 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
PCDH11XQ9BZA7 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC25.22■■□□□ 1.63
PCDH11XQ9BZA7 DFFB-212ENST00000625756 649 ntTSL 5 BASIC25.22■■□□□ 1.63
PCDH11XQ9BZA7 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PCDH11XQ9BZA7 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PCDH11XQ9BZA7 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC25.22■■□□□ 1.63
PCDH11XQ9BZA7 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC25.22■■□□□ 1.63
PCDH11XQ9BZA7 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC25.22■■□□□ 1.63
PCDH11XQ9BZA7 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PCDH11XQ9BZA7 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC25.22■■□□□ 1.63
PCDH11XQ9BZA7 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC25.22■■□□□ 1.63
PCDH11XQ9BZA7 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
PCDH11XQ9BZA7 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC25.21■■□□□ 1.63
PCDH11XQ9BZA7 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
PCDH11XQ9BZA7 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC25.21■■□□□ 1.63
PCDH11XQ9BZA7 DET1-207ENST00000564406 2315 ntTSL 2 BASIC25.21■■□□□ 1.63
PCDH11XQ9BZA7 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC25.21■■□□□ 1.63
PCDH11XQ9BZA7 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC25.21■■□□□ 1.63
PCDH11XQ9BZA7 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms