Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
YIPF4Q9BSR8 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
YIPF4Q9BSR8 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
YIPF4Q9BSR8 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
YIPF4Q9BSR8 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
YIPF4Q9BSR8 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
YIPF4Q9BSR8 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
YIPF4Q9BSR8 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
YIPF4Q9BSR8 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
YIPF4Q9BSR8 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.24■□□□□ 0.51
YIPF4Q9BSR8 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
YIPF4Q9BSR8 AL032819.2-201ENST00000624543 2162 ntBASIC18.24■□□□□ 0.51
YIPF4Q9BSR8 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.24■□□□□ 0.51
YIPF4Q9BSR8 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
YIPF4Q9BSR8 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
YIPF4Q9BSR8 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
YIPF4Q9BSR8 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
YIPF4Q9BSR8 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
YIPF4Q9BSR8 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
YIPF4Q9BSR8 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
YIPF4Q9BSR8 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
YIPF4Q9BSR8 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.24■□□□□ 0.51
YIPF4Q9BSR8 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
YIPF4Q9BSR8 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
YIPF4Q9BSR8 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
YIPF4Q9BSR8 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.24■□□□□ 0.51
YIPF4Q9BSR8 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.24■□□□□ 0.51
YIPF4Q9BSR8 AL121906.2-201ENST00000621597 723 ntBASIC18.24■□□□□ 0.51
YIPF4Q9BSR8 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
YIPF4Q9BSR8 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
YIPF4Q9BSR8 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
YIPF4Q9BSR8 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
YIPF4Q9BSR8 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
YIPF4Q9BSR8 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.24■□□□□ 0.51
YIPF4Q9BSR8 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
YIPF4Q9BSR8 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.24■□□□□ 0.51
YIPF4Q9BSR8 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
YIPF4Q9BSR8 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.24■□□□□ 0.51
YIPF4Q9BSR8 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
YIPF4Q9BSR8 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.24■□□□□ 0.51
YIPF4Q9BSR8 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
YIPF4Q9BSR8 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
YIPF4Q9BSR8 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
YIPF4Q9BSR8 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
YIPF4Q9BSR8 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
YIPF4Q9BSR8 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
YIPF4Q9BSR8 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
YIPF4Q9BSR8 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
YIPF4Q9BSR8 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
YIPF4Q9BSR8 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
YIPF4Q9BSR8 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
YIPF4Q9BSR8 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
YIPF4Q9BSR8 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
YIPF4Q9BSR8 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
YIPF4Q9BSR8 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
YIPF4Q9BSR8 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
YIPF4Q9BSR8 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
YIPF4Q9BSR8 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
YIPF4Q9BSR8 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
YIPF4Q9BSR8 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.23■□□□□ 0.51
YIPF4Q9BSR8 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.23■□□□□ 0.51
YIPF4Q9BSR8 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.23■□□□□ 0.51
YIPF4Q9BSR8 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.23■□□□□ 0.51
YIPF4Q9BSR8 UNC93B4-201ENST00000505679 747 ntBASIC18.23■□□□□ 0.51
YIPF4Q9BSR8 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.23■□□□□ 0.51
YIPF4Q9BSR8 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
YIPF4Q9BSR8 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.23■□□□□ 0.51
YIPF4Q9BSR8 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
YIPF4Q9BSR8 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
YIPF4Q9BSR8 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
YIPF4Q9BSR8 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.23■□□□□ 0.51
YIPF4Q9BSR8 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
YIPF4Q9BSR8 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
YIPF4Q9BSR8 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
YIPF4Q9BSR8 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
YIPF4Q9BSR8 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
YIPF4Q9BSR8 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
YIPF4Q9BSR8 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.22■□□□□ 0.51
YIPF4Q9BSR8 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
YIPF4Q9BSR8 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.22■□□□□ 0.51
YIPF4Q9BSR8 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.22■□□□□ 0.51
YIPF4Q9BSR8 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
YIPF4Q9BSR8 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
YIPF4Q9BSR8 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
YIPF4Q9BSR8 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
YIPF4Q9BSR8 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.22■□□□□ 0.51
YIPF4Q9BSR8 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
YIPF4Q9BSR8 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
YIPF4Q9BSR8 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
YIPF4Q9BSR8 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
YIPF4Q9BSR8 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
YIPF4Q9BSR8 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
YIPF4Q9BSR8 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
YIPF4Q9BSR8 AP006587.1-201ENST00000534129 1502 ntBASIC18.22■□□□□ 0.51
YIPF4Q9BSR8 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.22■□□□□ 0.51
YIPF4Q9BSR8 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
YIPF4Q9BSR8 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
YIPF4Q9BSR8 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
YIPF4Q9BSR8 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.22■□□□□ 0.51
YIPF4Q9BSR8 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms