Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
AP1S3Q96PC3 RASA4CP-201ENST00000424092 1398 ntBASIC14.65□□□□□ -0.06
AP1S3Q96PC3 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
AP1S3Q96PC3 EDA-201ENST00000338901 1233 ntBASIC14.65□□□□□ -0.06
AP1S3Q96PC3 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
AP1S3Q96PC3 EBPL-204ENST00000378272 766 ntTSL 3 BASIC14.65□□□□□ -0.06
AP1S3Q96PC3 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
AP1S3Q96PC3 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
AP1S3Q96PC3 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
AP1S3Q96PC3 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
AP1S3Q96PC3 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC14.65□□□□□ -0.06
AP1S3Q96PC3 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC14.65□□□□□ -0.06
AP1S3Q96PC3 TPRG1LP1-201ENST00000598702 760 ntBASIC14.65□□□□□ -0.06
AP1S3Q96PC3 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
AP1S3Q96PC3 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
AP1S3Q96PC3 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
AP1S3Q96PC3 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
AP1S3Q96PC3 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
AP1S3Q96PC3 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
AP1S3Q96PC3 TMEM179-206ENST00000616017 1645 ntBASIC14.65□□□□□ -0.06
AP1S3Q96PC3 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.65□□□□□ -0.06
AP1S3Q96PC3 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC14.65□□□□□ -0.06
AP1S3Q96PC3 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.65□□□□□ -0.06
AP1S3Q96PC3 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
AP1S3Q96PC3 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC14.65□□□□□ -0.06
AP1S3Q96PC3 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
AP1S3Q96PC3 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
AP1S3Q96PC3 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
AP1S3Q96PC3 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
AP1S3Q96PC3 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC14.65□□□□□ -0.06
AP1S3Q96PC3 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC14.65□□□□□ -0.07
AP1S3Q96PC3 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
AP1S3Q96PC3 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
AP1S3Q96PC3 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC14.64□□□□□ -0.07
AP1S3Q96PC3 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP1S3Q96PC3 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP1S3Q96PC3 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC14.64□□□□□ -0.07
AP1S3Q96PC3 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP1S3Q96PC3 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP1S3Q96PC3 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP1S3Q96PC3 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP1S3Q96PC3 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC14.64□□□□□ -0.07
AP1S3Q96PC3 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
AP1S3Q96PC3 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP1S3Q96PC3 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP1S3Q96PC3 NT5C3AP1-201ENST00000394500 1012 ntBASIC14.64□□□□□ -0.07
AP1S3Q96PC3 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP1S3Q96PC3 AC091305.1-201ENST00000479476 895 ntBASIC14.64□□□□□ -0.07
AP1S3Q96PC3 SERP1-208ENST00000491660 830 ntTSL 2 BASIC14.64□□□□□ -0.07
AP1S3Q96PC3 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC14.64□□□□□ -0.07
AP1S3Q96PC3 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC14.64□□□□□ -0.07
AP1S3Q96PC3 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC14.64□□□□□ -0.07
AP1S3Q96PC3 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
AP1S3Q96PC3 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC14.64□□□□□ -0.07
AP1S3Q96PC3 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP1S3Q96PC3 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.64□□□□□ -0.07
AP1S3Q96PC3 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
AP1S3Q96PC3 DPP3P2-201ENST00000416030 1696 ntBASIC14.64□□□□□ -0.07
AP1S3Q96PC3 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
AP1S3Q96PC3 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP1S3Q96PC3 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
AP1S3Q96PC3 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC14.63□□□□□ -0.07
AP1S3Q96PC3 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.63□□□□□ -0.07
AP1S3Q96PC3 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP1S3Q96PC3 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP1S3Q96PC3 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
AP1S3Q96PC3 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.63□□□□□ -0.07
AP1S3Q96PC3 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
AP1S3Q96PC3 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP1S3Q96PC3 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP1S3Q96PC3 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP1S3Q96PC3 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP1S3Q96PC3 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP1S3Q96PC3 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC14.63□□□□□ -0.07
AP1S3Q96PC3 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
AP1S3Q96PC3 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP1S3Q96PC3 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP1S3Q96PC3 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC14.63□□□□□ -0.07
AP1S3Q96PC3 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC14.63□□□□□ -0.07
AP1S3Q96PC3 PBX2P1-201ENST00000493219 1291 ntBASIC14.63□□□□□ -0.07
AP1S3Q96PC3 NOC2LP1-202ENST00000452600 2235 ntBASIC14.63□□□□□ -0.07
AP1S3Q96PC3 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
AP1S3Q96PC3 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP1S3Q96PC3 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
AP1S3Q96PC3 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
AP1S3Q96PC3 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC14.62□□□□□ -0.07
AP1S3Q96PC3 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
AP1S3Q96PC3 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
AP1S3Q96PC3 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
AP1S3Q96PC3 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
AP1S3Q96PC3 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
AP1S3Q96PC3 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
AP1S3Q96PC3 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
AP1S3Q96PC3 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC14.62□□□□□ -0.07
AP1S3Q96PC3 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
AP1S3Q96PC3 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
AP1S3Q96PC3 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC14.62□□□□□ -0.07
AP1S3Q96PC3 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
AP1S3Q96PC3 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
AP1S3Q96PC3 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms