Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF48Q96MX3 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
ZNF48Q96MX3 AC099778.1-201ENST00000568593 1911 ntBASIC15.81■□□□□ 0.12
ZNF48Q96MX3 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC15.81■□□□□ 0.12
ZNF48Q96MX3 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC15.81■□□□□ 0.12
ZNF48Q96MX3 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF48Q96MX3 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC15.8■□□□□ 0.12
ZNF48Q96MX3 SMG8-203ENST00000578922 2178 ntBASIC15.8■□□□□ 0.12
ZNF48Q96MX3 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF48Q96MX3 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC15.8■□□□□ 0.12
ZNF48Q96MX3 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF48Q96MX3 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC15.8■□□□□ 0.12
ZNF48Q96MX3 GOLGA6L3-201ENST00000507199 1679 ntBASIC15.8■□□□□ 0.12
ZNF48Q96MX3 PHGDH-210ENST00000641115 1638 ntBASIC15.8■□□□□ 0.12
ZNF48Q96MX3 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF48Q96MX3 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC15.8■□□□□ 0.12
ZNF48Q96MX3 AC073508.3-201ENST00000619697 1419 ntBASIC15.8■□□□□ 0.12
ZNF48Q96MX3 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
ZNF48Q96MX3 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC15.8■□□□□ 0.12
ZNF48Q96MX3 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF48Q96MX3 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF48Q96MX3 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF48Q96MX3 PRR31-201ENST00000371629 978 ntTSL 2 BASIC15.8■□□□□ 0.12
ZNF48Q96MX3 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC15.8■□□□□ 0.12
ZNF48Q96MX3 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC15.8■□□□□ 0.12
ZNF48Q96MX3 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC15.8■□□□□ 0.12
ZNF48Q96MX3 AL137013.1-201ENST00000432946 1228 ntBASIC15.8■□□□□ 0.12
ZNF48Q96MX3 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC15.8■□□□□ 0.12
ZNF48Q96MX3 SLC25A3P1-201ENST00000443844 931 ntBASIC15.8■□□□□ 0.12
ZNF48Q96MX3 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC15.8■□□□□ 0.12
ZNF48Q96MX3 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC15.8■□□□□ 0.12
ZNF48Q96MX3 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF48Q96MX3 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF48Q96MX3 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC15.8■□□□□ 0.12
ZNF48Q96MX3 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC15.8■□□□□ 0.12
ZNF48Q96MX3 AC026271.3-201ENST00000571884 352 ntBASIC15.8■□□□□ 0.12
ZNF48Q96MX3 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
ZNF48Q96MX3 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC15.8■□□□□ 0.12
ZNF48Q96MX3 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF48Q96MX3 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF48Q96MX3 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF48Q96MX3 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF48Q96MX3 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
ZNF48Q96MX3 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF48Q96MX3 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF48Q96MX3 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC15.8■□□□□ 0.12
ZNF48Q96MX3 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF48Q96MX3 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC15.79■□□□□ 0.12
ZNF48Q96MX3 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC15.79■□□□□ 0.12
ZNF48Q96MX3 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC15.79■□□□□ 0.12
ZNF48Q96MX3 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC15.79■□□□□ 0.12
ZNF48Q96MX3 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC15.79■□□□□ 0.12
ZNF48Q96MX3 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
ZNF48Q96MX3 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF48Q96MX3 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC15.79■□□□□ 0.12
ZNF48Q96MX3 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC15.79■□□□□ 0.12
ZNF48Q96MX3 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF48Q96MX3 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF48Q96MX3 ARMC10P1-201ENST00000313754 855 ntBASIC15.79■□□□□ 0.12
ZNF48Q96MX3 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC15.79■□□□□ 0.12
ZNF48Q96MX3 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC15.79■□□□□ 0.12
ZNF48Q96MX3 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC15.79■□□□□ 0.12
ZNF48Q96MX3 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC15.79■□□□□ 0.12
ZNF48Q96MX3 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC15.79■□□□□ 0.12
ZNF48Q96MX3 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF48Q96MX3 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF48Q96MX3 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC15.79■□□□□ 0.12
ZNF48Q96MX3 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC15.79■□□□□ 0.12
ZNF48Q96MX3 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF48Q96MX3 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF48Q96MX3 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
ZNF48Q96MX3 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
ZNF48Q96MX3 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF48Q96MX3 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC15.78■□□□□ 0.12
ZNF48Q96MX3 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC15.78■□□□□ 0.12
ZNF48Q96MX3 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF48Q96MX3 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF48Q96MX3 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF48Q96MX3 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
ZNF48Q96MX3 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
ZNF48Q96MX3 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF48Q96MX3 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF48Q96MX3 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC15.78■□□□□ 0.12
ZNF48Q96MX3 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
ZNF48Q96MX3 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF48Q96MX3 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC15.78■□□□□ 0.12
ZNF48Q96MX3 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC15.78■□□□□ 0.12
ZNF48Q96MX3 CFL2-205ENST00000555765 632 ntTSL 2 BASIC15.78■□□□□ 0.12
ZNF48Q96MX3 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC15.78■□□□□ 0.12
ZNF48Q96MX3 NT5C-211ENST00000582170 653 ntTSL 3 BASIC15.78■□□□□ 0.12
ZNF48Q96MX3 RBM42-202ENST00000586618 771 ntTSL 3 BASIC15.78■□□□□ 0.12
ZNF48Q96MX3 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC15.78■□□□□ 0.12
ZNF48Q96MX3 AL590326.2-201ENST00000625139 305 ntBASIC15.78■□□□□ 0.12
ZNF48Q96MX3 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF48Q96MX3 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF48Q96MX3 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC15.78■□□□□ 0.12
ZNF48Q96MX3 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC15.78■□□□□ 0.12
ZNF48Q96MX3 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF48Q96MX3 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF48Q96MX3 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms